aboutsummaryrefslogtreecommitdiff
path: root/bh20sequploader/bh20seq-options.yml
diff options
context:
space:
mode:
Diffstat (limited to 'bh20sequploader/bh20seq-options.yml')
-rw-r--r--bh20sequploader/bh20seq-options.yml9
1 files changed, 9 insertions, 0 deletions
diff --git a/bh20sequploader/bh20seq-options.yml b/bh20sequploader/bh20seq-options.yml
index 7320ecf..4c1d15c 100644
--- a/bh20sequploader/bh20seq-options.yml
+++ b/bh20sequploader/bh20seq-options.yml
@@ -15,6 +15,15 @@ host_sex:
Female: http://purl.obolibrary.org/obo/PATO_0000383
Intersex: http://purl.obolibrary.org/obo/PATO_0001340
+host_health_status:
+ healthy: http://purl.obolibrary.org/obo/NCIT_C115935
+ asymptomatic: http://purl.obolibrary.org/obo/NCIT_C3833
+ sympotmatic: http://purl.obolibrary.org/obo/NCIT_C25269
+ admitted to hospital: http://purl.obolibrary.org/obo/GENEPIO_0002020
+ discharged from hospital: http://purl.obolibrary.org/obo/GENEPIO_0001849
+ dead: http://purl.obolibrary.org/obo/NCIT_C28554
+ alive: http://purl.obolibrary.org/obo/NCIT_C37987
+
sample_sequencing_technology:
Illumina NextSeq 500: http://www.ebi.ac.uk/efo/EFO_0009173
Illumina NextSeq 550: http://www.ebi.ac.uk/efo/EFO_0008566