diff options
| -rw-r--r-- | bh20simplewebuploader/templates/blog.html | 1 | ||||
| -rw-r--r-- | bh20simplewebuploader/templates/blurb.html | 10 | ||||
| -rw-r--r-- | bh20simplewebuploader/templates/footer.html | 18 | ||||
| -rw-r--r-- | doc/blog/using-covid-19-pubseq-part3.html | 28 | ||||
| -rw-r--r-- | doc/blog/using-covid-19-pubseq-part3.org | 10 |
5 files changed, 26 insertions, 41 deletions
diff --git a/bh20simplewebuploader/templates/blog.html b/bh20simplewebuploader/templates/blog.html index 3069dd3..8cb6ce0 100644 --- a/bh20simplewebuploader/templates/blog.html +++ b/bh20simplewebuploader/templates/blog.html @@ -4,6 +4,7 @@ <body> {% include 'banner.html' %} {% include 'menu.html' %} + {% include 'blurb.html' %} {% if embed %} {{ embed|safe }} diff --git a/bh20simplewebuploader/templates/blurb.html b/bh20simplewebuploader/templates/blurb.html new file mode 100644 index 0000000..7bfe2ab --- /dev/null +++ b/bh20simplewebuploader/templates/blurb.html @@ -0,0 +1,10 @@ +<p> + This is the COVID-19 Public Sequence Resource (COVID-19 PubSeq) for + SARS-CoV-2 virus sequences. COVID-19 PubSeq is a repository for + sequences with a low barrier to entry for uploading sequence data + using best practices. I.e., data published with a creative commons + CC0 or CC-4.0 license with metadata using state-of-the art standards + and, perhaps most importantly, providing standardised workflows that + get triggered on upload, so that results are immediately available + in standardised data formats. +</p> diff --git a/bh20simplewebuploader/templates/footer.html b/bh20simplewebuploader/templates/footer.html index e72d1c5..e3923a7 100644 --- a/bh20simplewebuploader/templates/footer.html +++ b/bh20simplewebuploader/templates/footer.html @@ -4,19 +4,15 @@ <div class="about"> <div> <h1>ABOUT</h1> + {% include 'blurb.html' %} <p> - This a public repository created at the COVID-19 BioHackathon - that has a low barrier to entry for uploading sequence data using - best practices. I.e., data is published with a creative commons - 4.0 (CC-4.0) license with metadata using state-of-the art - standards and, perhaps most importantly, providing standardized - workflows that get triggered on upload, so that results are - immediately available in standardized data formats. The repository - will be maintained and expanded for the duration of the - pandemic. To contribute data simply upload it! To contribute code - and/or workflows see + The repository will be maintained and expanded for the + duration of the pandemic. To contribute data simply upload it! + To contribute code and/or workflows see the <a href="https://github.com/arvados/bh20-seq-resource">project - repository</a>. For more information see the <a href="https://github.com/arvados/bh20-seq-resource/blob/master/paper/paper.md">paper</a> (WIP). + repository</a>. For more information see + the <a href="/about">FAQ</a> and + the <a href="https://github.com/arvados/bh20-seq-resource/blob/master/paper/paper.md">paper</a> </p> </div> diff --git a/doc/blog/using-covid-19-pubseq-part3.html b/doc/blog/using-covid-19-pubseq-part3.html index 94d5a2e..ac32717 100644 --- a/doc/blog/using-covid-19-pubseq-part3.html +++ b/doc/blog/using-covid-19-pubseq-part3.html @@ -3,7 +3,7 @@ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"> <head> -<!-- 2020-05-27 Wed 07:27 --> +<!-- 2020-05-27 Wed 07:41 --> <meta http-equiv="Content-Type" content="text/html;charset=utf-8" /> <meta name="viewport" content="width=device-width, initial-scale=1" /> <title>COVID-19 PubSeq Uploading Data (part 3)</title> @@ -248,39 +248,27 @@ for the JavaScript code in this tag. <h2>Table of Contents</h2> <div id="text-table-of-contents"> <ul> -<li><a href="#orgb387609">1. Uploading Data</a></li> -<li><a href="#org7dd876c">2. What does this mean?</a></li> +<li><a href="#org074cf76">1. Uploading Data</a></li> +<li><a href="#org00e6dd5">2. What does this mean?</a></li> </ul> </div> </div> -<div id="outline-container-orgb387609" class="outline-2"> -<h2 id="orgb387609"><span class="section-number-2">1</span> Uploading Data</h2> +<div id="outline-container-org074cf76" class="outline-2"> +<h2 id="org074cf76"><span class="section-number-2">1</span> Uploading Data</h2> <div class="outline-text-2" id="text-1"> <p> <i>Work in progress!</i> </p> - -<p> -As part of the COVID-19 Biohackathon 2020 we formed a working group to -create a COVID-19 Public Sequence Resource (COVID-19 PubSeq) for -Corona virus sequences. The general idea is to create a repository -that has a low barrier to entry for uploading sequence data using best -practices. I.e., data published with a creative commons 4.0 (CC-4.0) -license with metadata using state-of-the art standards and, perhaps -most importantly, providing standardised workflows that get triggered -on upload, so that results are immediately available in standardised -data formats. -</p> </div> </div> -<div id="outline-container-org7dd876c" class="outline-2"> -<h2 id="org7dd876c"><span class="section-number-2">2</span> What does this mean?</h2> +<div id="outline-container-org00e6dd5" class="outline-2"> +<h2 id="org00e6dd5"><span class="section-number-2">2</span> What does this mean?</h2> </div> </div> <div id="postamble" class="status"> -<hr><small>Created by <a href="http://thebird.nl/">Pjotr Prins</a> (pjotr.public768 at thebird 'dot' nl) using Emacs org-mode and a healthy dose of Lisp!<br />Modified 2020-05-27 Wed 07:27</small>. +<hr><small>Created by <a href="http://thebird.nl/">Pjotr Prins</a> (pjotr.public768 at thebird 'dot' nl) using Emacs org-mode and a healthy dose of Lisp!<br />Modified 2020-05-27 Wed 07:41</small>. </div> </body> </html> diff --git a/doc/blog/using-covid-19-pubseq-part3.org b/doc/blog/using-covid-19-pubseq-part3.org index d088f78..1cd2db1 100644 --- a/doc/blog/using-covid-19-pubseq-part3.org +++ b/doc/blog/using-covid-19-pubseq-part3.org @@ -11,16 +11,6 @@ /Work in progress!/ -As part of the COVID-19 Biohackathon 2020 we formed a working group to -create a COVID-19 Public Sequence Resource (COVID-19 PubSeq) for -Corona virus sequences. The general idea is to create a repository -that has a low barrier to entry for uploading sequence data using best -practices. I.e., data published with a creative commons 4.0 (CC-4.0) -license with metadata using state-of-the art standards and, perhaps -most importantly, providing standardised workflows that get triggered -on upload, so that results are immediately available in standardised -data formats. - * Table of Contents :TOC:noexport: - [[#uploading-data][Uploading Data]] - [[#table-of-contents][Table of Contents]] |