diff options
| -rw-r--r-- | .gitignore | 4 | ||||
| -rwxr-xr-x | scripts/update_virtuoso/check_for_updates.py | 24 |
2 files changed, 14 insertions, 14 deletions
@@ -10,6 +10,10 @@ eggs/ *.egg-info/ *.egg +# Temp files +metadata.ttl +cache.txt + # Environments .env .venv diff --git a/scripts/update_virtuoso/check_for_updates.py b/scripts/update_virtuoso/check_for_updates.py index 1c7813a..0f84fb1 100755 --- a/scripts/update_virtuoso/check_for_updates.py +++ b/scripts/update_virtuoso/check_for_updates.py @@ -9,20 +9,22 @@ import requests import time +import sys + +assert(len(sys.argv)==4) +fn = sys.argv[1] +user = sys.argv[2] +pwd = sys.argv[3] + def upload(fn): # Upload into Virtuoso using CURL # cmd = "curl -X PUT --digest -u dba:dba -H Content-Type:text/turtle -T metadata.ttl -G http://localhost:8890/sparql-graph-crud-auth --data-urlencode graph=http://covid-19.genenetwork.org/graph".split(" ") - print("DELETE "+fn) - cmd = ("curl --digest --user dba:dba --verbose --url -G http://sparql.genenetwork.org/sparql-graph-crud-auth --data-urlencode graph=http://covid-19.genenetwork.org/graph -X DELETE" % pwd).split(" ") - print(cmd) - p = subprocess.Popen(cmd) - output = p.communicate()[0] - print(output) - assert(p.returncode == 0) + # print("DELETE "+fn) + # cmd = ("curl --digest --user dba:%s --verbose --url -G http://sparql.genenetwork.org/sparql-graph-crud-auth --data-urlencode graph=http://covid-19.genenetwork.org/graph -X DELETE" % pwd).split(" ") print("UPLOAD "+fn) - cmd = ("curl -X PUT --digest -u dba:%s -H Content-Type:text/turtle -T %s -G http://sparql.genenetwork.org/sparql-graph-crud-auth --data-urlencode graph=http://covid-19.genenetwork.org/graph" % pwd, fn ).split(" ") + cmd = ("curl -X PUT --digest -u dba:%s -H Content-Type:text/turtle -T %s -G http://sparql.genenetwork.org/sparql-graph-crud-auth --data-urlencode graph=http://covid-19.genenetwork.org/graph" % (pwd, fn) ).split(" ") print(cmd) p = subprocess.Popen(cmd) output = p.communicate()[0] @@ -43,12 +45,6 @@ t_stamp = time.strptime(last_modified_str,"%a, %d %b %Y %H:%M:%S %Z" ) print(t_stamp) # OK, it works, now check last stored value -import sys -assert(len(sys.argv)==4) -fn = sys.argv[1] -user = sys.argv[2] -pwd = sys.argv[3] - import os.path stamp = None if os.path.isfile(fn): |