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| -rw-r--r-- | scripts/README.md | 6 |
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diff --git a/scripts/README.md b/scripts/README.md new file mode 100644 index 0000000..a3ed1b6 --- /dev/null +++ b/scripts/README.md @@ -0,0 +1,6 @@ +### Instructions for download and/or prepare the data and/ or the metadata + +Just go into the `download_genbank_data` or `download_sra_data` directory and execute the python3 script inside. + +- `download_genbank_data/from_genbank_to_fasta_and_yaml.py` downloads the data and the matadata, preparing the FASTA and the YAML files; +- `download_sra_data/download_sra_data.py` creates the metadata in the form of YAML files from the SraExperimentPackage.XXX.xml.gz file in the same directory. |