diff options
| -rw-r--r-- | workflows/pangenome-generate/odgi-build.cwl | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pangenome-generate/odgi-build.cwl b/workflows/pangenome-generate/odgi-build.cwl index 0bd6a20..b594438 100644 --- a/workflows/pangenome-generate/odgi-build.cwl +++ b/workflows/pangenome-generate/odgi-build.cwl @@ -21,6 +21,6 @@ hints: listing: - entry: $(inputs.inputGFA) writable: true -arguments: [odgi, build, -g, $(inputs.inputGFA), -s, -o, -, +arguments: [odgi, build, -g, $(inputs.inputGFA), -o, -, {shellQuote: false, valueFrom: "|"}, odgi, sort, -i, -, -p, s, -o, $(inputs.inputGFA.nameroot).odgi] |