aboutsummaryrefslogtreecommitdiff
path: root/workflows/yamlfa2ttl/check_metadata.cwl
diff options
context:
space:
mode:
authorAndreaGuarracino2021-01-08 23:44:47 +0100
committerAndreaGuarracino2021-01-08 23:44:47 +0100
commit53a47a18a45270c3f037fabe9cc973c66bfe50bf (patch)
tree1fb71fae0d629127a5da6f9ad879fff259016b14 /workflows/yamlfa2ttl/check_metadata.cwl
parent2ddf72a4028475eb65dfeab153f3565e698d5338 (diff)
downloadbh20-seq-resource-53a47a18a45270c3f037fabe9cc973c66bfe50bf.tar.gz
bh20-seq-resource-53a47a18a45270c3f037fabe9cc973c66bfe50bf.tar.lz
bh20-seq-resource-53a47a18a45270c3f037fabe9cc973c66bfe50bf.zip
sample_id in the FASTA has to match the sample_id in the YAMLyamlfa2ttl
Diffstat (limited to 'workflows/yamlfa2ttl/check_metadata.cwl')
-rw-r--r--workflows/yamlfa2ttl/check_metadata.cwl7
1 files changed, 5 insertions, 2 deletions
diff --git a/workflows/yamlfa2ttl/check_metadata.cwl b/workflows/yamlfa2ttl/check_metadata.cwl
index 72c4d36..593155b 100644
--- a/workflows/yamlfa2ttl/check_metadata.cwl
+++ b/workflows/yamlfa2ttl/check_metadata.cwl
@@ -12,13 +12,16 @@ inputs:
path_yaml:
type: string
inputBinding: {position: 2}
+ path_fasta:
+ type: string
+ inputBinding: {position: 3}
path_schema_yaml:
type: File
- inputBinding: {position: 3}
+ inputBinding: {position: 4}
default: {class: File, location: ../../bh20sequploader/bh20seq-schema.yml}
path_shex_rdf:
type: File
- inputBinding: {position: 4}
+ inputBinding: {position: 5}
default: {class: File, location: ../../bh20sequploader/bh20seq-shex.rdf}
outputs: []