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| author | Pjotr Prins | 2021-01-07 03:17:47 -0600 |
|---|---|---|
| committer | Pjotr Prins | 2021-01-07 03:17:59 -0600 |
| commit | 329a1a7e122eda41016185d1b1e8d50d97f8857b (patch) | |
| tree | 8dbc60b37311beea40730c6f70d4c738a1e919dd /workflows/pull-data/genbank/genbank.py | |
| parent | 27a2b926036211469eccbf8c3d9580182482bdc2 (diff) | |
| download | bh20-seq-resource-329a1a7e122eda41016185d1b1e8d50d97f8857b.tar.gz bh20-seq-resource-329a1a7e122eda41016185d1b1e8d50d97f8857b.tar.lz bh20-seq-resource-329a1a7e122eda41016185d1b1e8d50d97f8857b.zip | |
Allow for xml and xml.gz files
Diffstat (limited to 'workflows/pull-data/genbank/genbank.py')
| -rw-r--r-- | workflows/pull-data/genbank/genbank.py | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/workflows/pull-data/genbank/genbank.py b/workflows/pull-data/genbank/genbank.py index 85d615c..026c03f 100644 --- a/workflows/pull-data/genbank/genbank.py +++ b/workflows/pull-data/genbank/genbank.py @@ -111,7 +111,8 @@ def get_metadata(id, gbseq): # print(n,file=sys.stderr) if n != 'Unpublished': institute,address = n.split(',',1) - submitter.submitter_name = institute.split(') ')[1] + if ")" in institute: + submitter.submitter_name = institute.split(')')[1] submitter.submitter_address = address.strip() except AttributeError: pass |