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| author | Peter Amstutz | 2020-11-18 18:07:04 -0500 |
|---|---|---|
| committer | Peter Amstutz | 2020-11-18 18:07:04 -0500 |
| commit | 0b2ac8667451f9dee7121b2d3d37f8f580e75cfb (patch) | |
| tree | e26ba03c75d275dfc5a647bbef17469bb4e67248 /workflows/pangenome-generate | |
| parent | 81daa0acc4c4a0827e1c1198f054f4d4dacd1daf (diff) | |
| download | bh20-seq-resource-0b2ac8667451f9dee7121b2d3d37f8f580e75cfb.tar.gz bh20-seq-resource-0b2ac8667451f9dee7121b2d3d37f8f580e75cfb.tar.lz bh20-seq-resource-0b2ac8667451f9dee7121b2d3d37f8f580e75cfb.zip | |
Fix typo. Give from_sparql more RAM.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Diffstat (limited to 'workflows/pangenome-generate')
| -rw-r--r-- | workflows/pangenome-generate/from_sparql.cwl | 2 | ||||
| -rw-r--r-- | workflows/pangenome-generate/pangenome-generate_spoa.cwl | 2 |
2 files changed, 3 insertions, 1 deletions
diff --git a/workflows/pangenome-generate/from_sparql.cwl b/workflows/pangenome-generate/from_sparql.cwl index 5bc0792..ab85656 100644 --- a/workflows/pangenome-generate/from_sparql.cwl +++ b/workflows/pangenome-generate/from_sparql.cwl @@ -6,6 +6,8 @@ requirements: FROM debian:10 RUN apt-get update && apt-get -yq --no-install-recommends install samtools python3-rdflib dockerImageId: rdflib-and-samtools + ResourceRequirement: + ramMin: 1024 inputs: script: type: File diff --git a/workflows/pangenome-generate/pangenome-generate_spoa.cwl b/workflows/pangenome-generate/pangenome-generate_spoa.cwl index a640d15..b623054 100644 --- a/workflows/pangenome-generate/pangenome-generate_spoa.cwl +++ b/workflows/pangenome-generate/pangenome-generate_spoa.cwl @@ -19,7 +19,7 @@ outputs: odgiGraph: type: File outputSource: buildGraph/odgiGraph - odgiPNG: + odgiPNG: type: File outputSource: vizGraph/graph_image spoaGFA: |