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| author | Peter Amstutz | 2020-05-04 09:09:46 -0400 |
|---|---|---|
| committer | Peter Amstutz | 2020-05-04 11:45:44 -0400 |
| commit | 7ae370273020132e7d8bfe7e07591264d6a47960 (patch) | |
| tree | 7efd4f586f2b38b59a939276939552445d51882a /workflows/pangenome-generate | |
| parent | dc6bdac06d06020fa0cb1cc5021e2136c3950a09 (diff) | |
| download | bh20-seq-resource-7ae370273020132e7d8bfe7e07591264d6a47960.tar.gz bh20-seq-resource-7ae370273020132e7d8bfe7e07591264d6a47960.tar.lz bh20-seq-resource-7ae370273020132e7d8bfe7e07591264d6a47960.zip | |
Increase RAM for minimap2
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Diffstat (limited to 'workflows/pangenome-generate')
| -rw-r--r-- | workflows/pangenome-generate/minimap2.cwl | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pangenome-generate/minimap2.cwl b/workflows/pangenome-generate/minimap2.cwl index 42d1dce..bf8eb4c 100644 --- a/workflows/pangenome-generate/minimap2.cwl +++ b/workflows/pangenome-generate/minimap2.cwl @@ -12,7 +12,7 @@ hints: ResourceRequirement: coresMin: 8 coresMax: 32 - ramMin: $(9 * 1024) + ramMin: $(15 * 1024) outdirMin: $(Math.ceil(inputs.readsFA.size/(1024*1024*1024) + 20)) stdout: $(inputs.readsFA.nameroot).paf baseCommand: minimap2 |