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authorPeter Amstutz2020-08-26 17:36:12 -0400
committerPeter Amstutz2020-08-26 17:36:12 -0400
commitb69b8560132786e16ea6a997d65fd8c43381cc03 (patch)
treef180f124e08d1b09b5f0fe5b01ed441f36cc59a6 /workflows/pangenome-generate
parentb4b4b826ae477acdb5d2c3372a69673029ea805c (diff)
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Increase RAM for odgi-build-from-spoa-gfa
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Diffstat (limited to 'workflows/pangenome-generate')
-rw-r--r--workflows/pangenome-generate/odgi-build-from-spoa-gfa.cwl2
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pangenome-generate/odgi-build-from-spoa-gfa.cwl b/workflows/pangenome-generate/odgi-build-from-spoa-gfa.cwl
index 1eadc88..eee4031 100644
--- a/workflows/pangenome-generate/odgi-build-from-spoa-gfa.cwl
+++ b/workflows/pangenome-generate/odgi-build-from-spoa-gfa.cwl
@@ -14,7 +14,7 @@ hints:
dockerPull: "odgi-bash-binutils:latest"
ResourceRequirement:
coresMin: 4
- ramMin: $(7 * 1024)
+ ramMin: $(15 * 1024)
outdirMin: $(Math.ceil((inputs.inputGFA.size/(1024*1024*1024)+1) * 2))
InitialWorkDirRequirement:
# Will fail if input file is not writable (odgi bug)