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| author | Peter Amstutz | 2020-05-26 17:30:30 -0400 |
|---|---|---|
| committer | Peter Amstutz | 2020-05-26 18:12:23 -0400 |
| commit | 7a96d0b1b15ab28fe3a618db35364891ab5d0328 (patch) | |
| tree | 570532d2cc4c490175a4042d7bfabaad5120312d /workflows/pangenome-generate/relabel-seqs.cwl | |
| parent | 30f3f8b0e9efbc954518fc8ea621b53c9591c83a (diff) | |
| download | bh20-seq-resource-7a96d0b1b15ab28fe3a618db35364891ab5d0328.tar.gz bh20-seq-resource-7a96d0b1b15ab28fe3a618db35364891ab5d0328.tar.lz bh20-seq-resource-7a96d0b1b15ab28fe3a618db35364891ab5d0328.zip | |
Can have list of sequence labels to exclude from combined fasta
refs #68
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Diffstat (limited to 'workflows/pangenome-generate/relabel-seqs.cwl')
| -rw-r--r-- | workflows/pangenome-generate/relabel-seqs.cwl | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/workflows/pangenome-generate/relabel-seqs.cwl b/workflows/pangenome-generate/relabel-seqs.cwl index c1f17a4..367b9bf 100644 --- a/workflows/pangenome-generate/relabel-seqs.cwl +++ b/workflows/pangenome-generate/relabel-seqs.cwl @@ -3,10 +3,13 @@ class: CommandLineTool inputs: readsFA: File[] subjects: string[] + exclude: + type: File? + inputBinding: {position: 2} script: type: File default: {class: File, location: relabel-seqs.py} - inputBinding: {} + inputBinding: {position: 1} outputs: relabeledSeqs: type: File |