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| author | Peter Amstutz | 2020-04-20 12:55:18 -0400 |
|---|---|---|
| committer | Peter Amstutz | 2020-04-20 12:55:18 -0400 |
| commit | d781e42c9adac07253cb928ae66e9b7314710267 (patch) | |
| tree | 4718165cbc069169eaff98080c61c5f07763ffc1 /workflows/pangenome-generate/merge-metadata.cwl | |
| parent | 1219eaf496c899f3043b90e30eb956f0f363bfb3 (diff) | |
| download | bh20-seq-resource-d781e42c9adac07253cb928ae66e9b7314710267.tar.gz bh20-seq-resource-d781e42c9adac07253cb928ae66e9b7314710267.tar.lz bh20-seq-resource-d781e42c9adac07253cb928ae66e9b7314710267.zip | |
Move workflows into main repo
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Diffstat (limited to 'workflows/pangenome-generate/merge-metadata.cwl')
| -rw-r--r-- | workflows/pangenome-generate/merge-metadata.cwl | 18 |
1 files changed, 18 insertions, 0 deletions
diff --git a/workflows/pangenome-generate/merge-metadata.cwl b/workflows/pangenome-generate/merge-metadata.cwl new file mode 100644 index 0000000..9164c09 --- /dev/null +++ b/workflows/pangenome-generate/merge-metadata.cwl @@ -0,0 +1,18 @@ +cwlVersion: v1.1 +class: CommandLineTool +hints: + DockerRequirement: + dockerPull: commonworkflowlanguage/cwltool_module +inputs: + metadata: File[] + metadataSchema: File + subjects: string[] +outputs: + merged: stdout +stdout: mergedmetadata.ttl +requirements: + InitialWorkDirRequirement: + listing: + - entry: {$include: merge-metadata.py} + entryname: merge-metadata.py +baseCommand: [python3, merge-metadata.py] |