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authorPeter Amstutz2020-11-09 17:32:05 -0500
committerGitHub2020-11-09 17:32:05 -0500
commit74d46196ae69c0c557f64593910ada48d84b3654 (patch)
tree57c7df946e1aa1f2054eb49379439ebee4d4c0e6 /workflows/pangenome-generate/arv-main.cwl
parentb311e2ec0f1d02cf16152855dd8bdd760ed4578b (diff)
parent98a80bd64d8a495b8fddffdef6e07e5a3fbea1e3 (diff)
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Merge pull request #105 from arvados/fasta-subset-from-query
Extract subset of the all-sequences fasta by running a sparql query. Also includes some tweaks to the permalinks.
Diffstat (limited to 'workflows/pangenome-generate/arv-main.cwl')
-rw-r--r--workflows/pangenome-generate/arv-main.cwl2
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pangenome-generate/arv-main.cwl b/workflows/pangenome-generate/arv-main.cwl
index dae47e6..1d71ee3 100644
--- a/workflows/pangenome-generate/arv-main.cwl
+++ b/workflows/pangenome-generate/arv-main.cwl
@@ -36,7 +36,7 @@ steps:
run: collect-seqs.cwl
in:
src_project: src_project
- schema: metadataSchema
+ metadataSchema: metadataSchema
exclude: exclude
out: [relabeledSeqs, mergedMetadata]
pangenome-generate: