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authorPjotr Prins2021-01-05 09:34:26 +0000
committerPjotr Prins2021-01-05 09:34:26 +0000
commit9d75ce088e6388bf23ae077fd06b2a3f51be1bda (patch)
tree81a4491ca0dd37b458025cc7aa3e553a77b0fb30 /test
parent3c09a92423408d01b64e1b842c6b96778939d098 (diff)
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API: fix returned record to include original metadata
Diffstat (limited to 'test')
-rw-r--r--test/rest-api.org29
1 files changed, 29 insertions, 0 deletions
diff --git a/test/rest-api.org b/test/rest-api.org
index 66639c3..2ea2b11 100644
--- a/test/rest-api.org
+++ b/test/rest-api.org
@@ -36,6 +36,35 @@ curl http://covid19.genenetwork.org/api/version
}
#+end_src
+The current API can fetch data
+
+#+begin_src js
+curl http://covid19.genenetwork.org/api/search?s=MT533203.1
+[
+ {
+ "collection": "http://covid19.genenetwork.org/resource",
+ "fasta": "http://covid19.genenetwork.org/resource/lugli-4zz18-uovend31hdwa5ks",
+ "id": "MT533203.1",
+ "info": "http://identifiers.org/insdc/MT533203.1#sequence"
+ }
+]
+
+curl http://covid19.genenetwork.org/api/sample/MT533203.1.json
+[
+ {
+ "collection": "http://covid19.genenetwork.org/resource",
+ "date": "2020-04-27",
+ "fasta": "http://covid19.genenetwork.org/resource/lugli-4zz18-uovend31hdwa5ks",
+ "id": "MT533203.1",
+ "info": "http://identifiers.org/insdc/MT533203.1#sequence",
+ "mapper": "minimap v. 2.17",
+ "sequencer": "http://www.ebi.ac.uk/efo/EFO_0008632",
+ "specimen": "http://purl.obolibrary.org/obo/NCIT_C155831"
+ }
+]
+#+end_src
+
+
The Python3 version is
#+begin_src python :session :exports both