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authorPjotr Prins2020-12-24 09:15:39 +0000
committerGitHub2020-12-24 09:15:39 +0000
commitdf0421757e464f07b5e96b5444f1926784e7400f (patch)
treef9a9a262bb2d95a89a6ec1c96b98a2b166fb92b5 /scripts
parent00ba74b163f723bb7283624171f0c7c203dc99e5 (diff)
parentbfd830f9d777c456409958030142155043ec1c68 (diff)
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Merge pull request #117 from arvados/pangenome_workflow_abpoa
Pangenome workflow with abPOA
Diffstat (limited to 'scripts')
-rw-r--r--scripts/create_sra_metadata/create_sra_metadata.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/scripts/create_sra_metadata/create_sra_metadata.py b/scripts/create_sra_metadata/create_sra_metadata.py
index eebd9aa..35f61a5 100644
--- a/scripts/create_sra_metadata/create_sra_metadata.py
+++ b/scripts/create_sra_metadata/create_sra_metadata.py
@@ -232,7 +232,7 @@ for i, EXPERIMENT_PACKAGE in enumerate(EXPERIMENT_PACKAGE_SET):
taxon_id = SAMPLE.find('SAMPLE_NAME').find('TAXON_ID').text
info_for_yaml_dict['virus']['virus_species'] = "http://purl.obolibrary.org/obo/NCBITaxon_" + taxon_id
- # This script download and prepare data and metadata for samples that will be mapepd againg a referenceT
+ # This script download and prepare data and metadata for samples that will be mapped against a referenceT
info_for_yaml_dict['technology']['assembly_method'] = 'http://purl.obolibrary.org/obo/GENEPIO_0002028'
EXPERIMENT = EXPERIMENT_PACKAGE.find('EXPERIMENT')