aboutsummaryrefslogtreecommitdiff
path: root/scripts/uthsc_samples
diff options
context:
space:
mode:
authorPjotr Prins2020-11-08 10:50:24 +0000
committerPjotr Prins2020-11-08 10:50:24 +0000
commitb311e2ec0f1d02cf16152855dd8bdd760ed4578b (patch)
tree5547eb22b9959ea0862d0c45742f1ac0e13ac8fd /scripts/uthsc_samples
parentcb2200839e180d518167bce06395ae04c332ddf4 (diff)
downloadbh20-seq-resource-b311e2ec0f1d02cf16152855dd8bdd760ed4578b.tar.gz
bh20-seq-resource-b311e2ec0f1d02cf16152855dd8bdd760ed4578b.tar.lz
bh20-seq-resource-b311e2ec0f1d02cf16152855dd8bdd760ed4578b.zip
Uploaded UTHSC sequences
Diffstat (limited to 'scripts/uthsc_samples')
-rw-r--r--scripts/uthsc_samples/uthsc_samples.py2
1 files changed, 2 insertions, 0 deletions
diff --git a/scripts/uthsc_samples/uthsc_samples.py b/scripts/uthsc_samples/uthsc_samples.py
index 3ad2561..54c70ee 100644
--- a/scripts/uthsc_samples/uthsc_samples.py
+++ b/scripts/uthsc_samples/uthsc_samples.py
@@ -55,3 +55,5 @@ for index, row in table.iterrows():
locationx=locationx,
strain=strain
))
+
+ print(f"Run: python3 bh20sequploader/main.py scripts/uthsc_samples/yaml/{sample}.yaml scripts/uthsc_samples/yaml/{sample}.fa")