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author | Pjotr Prins | 2020-05-13 17:29:05 -0500 |
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committer | Pjotr Prins | 2020-05-13 17:29:05 -0500 |
commit | 5a82bb54ac7b345f904ba981368d29ccf4641875 (patch) | |
tree | 81ee973099c4ea9d85415d6b92077139c8889532 /scripts/update_virtuoso/check_for_updates.py | |
parent | 8ba790336086dc59a8819bfe4af486393158c219 (diff) | |
download | bh20-seq-resource-5a82bb54ac7b345f904ba981368d29ccf4641875.tar.gz bh20-seq-resource-5a82bb54ac7b345f904ba981368d29ccf4641875.tar.lz bh20-seq-resource-5a82bb54ac7b345f904ba981368d29ccf4641875.zip |
Virtuoso uploader: always upload countries and labels
Diffstat (limited to 'scripts/update_virtuoso/check_for_updates.py')
-rwxr-xr-x | scripts/update_virtuoso/check_for_updates.py | 12 |
1 files changed, 6 insertions, 6 deletions
diff --git a/scripts/update_virtuoso/check_for_updates.py b/scripts/update_virtuoso/check_for_updates.py index fb69ff4..3deed7f 100755 --- a/scripts/update_virtuoso/check_for_updates.py +++ b/scripts/update_virtuoso/check_for_updates.py @@ -10,6 +10,8 @@ import requests import time import sys +import os.path +import subprocess assert(len(sys.argv)==4) fn = sys.argv[1] @@ -31,11 +33,14 @@ def upload(fn): print(output) assert(p.returncode == 0) +# --- Always update these +upload("semantic_enrichment/labels.ttl") +upload("semantic_enrichment/countries.ttl") + url = 'https://download.lugli.arvadosapi.com/c=lugli-4zz18-z513nlpqm03hpca/_/mergedmetadata.ttl' # --- Fetch headers from TTL file on Arvados r = requests.head(url) print(r.headers) - print(r.headers['Last-Modified']) # --- Convert/validate time stamp @@ -45,14 +50,12 @@ t_stamp = time.strptime(last_modified_str,"%a, %d %b %Y %H:%M:%S %Z" ) print(t_stamp) # OK, it works, now check last stored value -import os.path stamp = None if os.path.isfile(fn): file = open(fn,"r") stamp = file.read() file.close -import subprocess if stamp != last_modified_str: print("Fetch metadata TTL") r = requests.get(url) @@ -61,8 +64,5 @@ if stamp != last_modified_str: f.write(r.text) f.close upload("metadata.ttl") - upload("semantic_enrichment/labels.ttl") - upload("semantic_enrichment/countries.ttl") - with open(fn,"w") as f: f.write(last_modified_str) |