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| author | lltommy | 2020-04-22 19:41:27 +0200 |
|---|---|---|
| committer | lltommy | 2020-04-22 19:41:27 +0200 |
| commit | a12fe94f174da766be612fbb2712b4db2ba98296 (patch) | |
| tree | 0c1a21fcfc638460d91309f7dfac3fdc967ca7c1 /scripts/foreach.sh | |
| parent | ba8b5d364f0ba96f3fef5214137d30ed00a8079d (diff) | |
| download | bh20-seq-resource-a12fe94f174da766be612fbb2712b4db2ba98296.tar.gz bh20-seq-resource-a12fe94f174da766be612fbb2712b4db2ba98296.tar.lz bh20-seq-resource-a12fe94f174da766be612fbb2712b4db2ba98296.zip | |
Small changes all around, trying to make the importer/metadata better
Diffstat (limited to 'scripts/foreach.sh')
| -rwxr-xr-x | scripts/foreach.sh | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/scripts/foreach.sh b/scripts/foreach.sh index 35b07b8..ddc9387 100755 --- a/scripts/foreach.sh +++ b/scripts/foreach.sh @@ -2,7 +2,7 @@ rm -rf validated fasta_and_yaml_* mkdir -p validated ./from_genbank_to_fasta_and_yaml.py -fasta_files=$(find fasta_and_yaml_20200421/ -name "*.fasta") +fasta_files=$(find fasta_and_yaml/ -name "*.fasta") for f in $fasta_files ; do yaml=$(echo $f | rev | cut -c7- | rev).yaml echo $f |