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| author | AndreaGuarracino | 2020-11-21 23:06:05 +0100 |
|---|---|---|
| committer | AndreaGuarracino | 2020-11-21 23:06:05 +0100 |
| commit | 1e9a735e84a8e89099b1de2ec66c56669caf6cc8 (patch) | |
| tree | 0beefb8e9f7a6321a5c8382b1be7b5b809c87d5e /scripts/create_sra_metadata | |
| parent | 862ae0235e3d1b105fa342cedf4aa59ae73d90c4 (diff) | |
| download | bh20-seq-resource-1e9a735e84a8e89099b1de2ec66c56669caf6cc8.tar.gz bh20-seq-resource-1e9a735e84a8e89099b1de2ec66c56669caf6cc8.tar.lz bh20-seq-resource-1e9a735e84a8e89099b1de2ec66c56669caf6cc8.zip | |
added abPOA workflow; typos
Diffstat (limited to 'scripts/create_sra_metadata')
| -rw-r--r-- | scripts/create_sra_metadata/create_sra_metadata.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/scripts/create_sra_metadata/create_sra_metadata.py b/scripts/create_sra_metadata/create_sra_metadata.py index eebd9aa..35f61a5 100644 --- a/scripts/create_sra_metadata/create_sra_metadata.py +++ b/scripts/create_sra_metadata/create_sra_metadata.py @@ -232,7 +232,7 @@ for i, EXPERIMENT_PACKAGE in enumerate(EXPERIMENT_PACKAGE_SET): taxon_id = SAMPLE.find('SAMPLE_NAME').find('TAXON_ID').text info_for_yaml_dict['virus']['virus_species'] = "http://purl.obolibrary.org/obo/NCBITaxon_" + taxon_id - # This script download and prepare data and metadata for samples that will be mapepd againg a referenceT + # This script download and prepare data and metadata for samples that will be mapped against a referenceT info_for_yaml_dict['technology']['assembly_method'] = 'http://purl.obolibrary.org/obo/GENEPIO_0002028' EXPERIMENT = EXPERIMENT_PACKAGE.find('EXPERIMENT') |