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authorAndreaGuarracino2021-01-07 23:46:18 +0100
committerAndreaGuarracino2021-01-07 23:46:18 +0100
commitc080c3cffedcc0cc99496b5e70fcfdf998978f16 (patch)
tree72c8fadd8d52d92f0caf3d40564e10c4ff1a1eb8 /example
parent7e2c0d4514ccfe2641a15881d53d2f31ae8573b9 (diff)
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fixed comments in the example yaml files
Diffstat (limited to 'example')
-rw-r--r--example/esr_example.yaml4
-rw-r--r--example/uthsc_example.yaml2
2 files changed, 3 insertions, 3 deletions
diff --git a/example/esr_example.yaml b/example/esr_example.yaml
index c97d0bf..c7bdb30 100644
--- a/example/esr_example.yaml
+++ b/example/esr_example.yaml
@@ -15,7 +15,7 @@ sample:
collection_date: "2020-02-26"
collection_location: https://www.wikidata.org/wiki/Q37100
specimen_source: [http://purl.obolibrary.org/obo/NCIT_C155831]
- source_database_accession: [http://identifiers.org/insdc/LC522350.1#sequence] ??
+ source_database_accession: [http://identifiers.org/insdc/LC522350.1#sequence]
additional_collection_information: Optional free text field for additional information
virus:
@@ -23,7 +23,7 @@ virus:
virus_strain: SARS-CoV-2/human/CHN/HS_8/2020
technology:
- sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] // Nanopore MinION
+ sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] # Nanopore MinION
alignment_protocol: https://github.com/ESR-NZ/NZ_SARS-CoV-2_genomics
assembly_method: "http://purl.obolibrary.org/obo/GENEPIO_0001628"
additional_technology_information: "Artic V3 workflow"
diff --git a/example/uthsc_example.yaml b/example/uthsc_example.yaml
index 661cf60..589a7a5 100644
--- a/example/uthsc_example.yaml
+++ b/example/uthsc_example.yaml
@@ -23,7 +23,7 @@ virus:
virus_strain: SARS-CoV-2/human/USA/AL_UT14/2020
technology:
- sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] // Nanopore MinION
+ sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] # Nanopore MinION
alignment_protocol: guppy
assembly_method: "http://purl.obolibrary.org/obo/GENEPIO_0001628"
additional_technology_information: Optional free text field for additional information