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authorPjotr Prins2020-05-06 09:03:08 -0500
committerPjotr Prins2020-05-06 09:03:08 -0500
commit0031e778ee1ad8b934411da5082fcb3115646e67 (patch)
treebe17fb9aff6351e967a9210cd4c58a60ad55a382 /example/metadata.yaml
parent7d7af6cde75d09da7a05cf5bc05ef2556c3aea92 (diff)
parentb6d846b5de6c67b28adab1fa520953115a1a1e30 (diff)
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Merge branch 'master' of github.com:arvados/bh20-seq-resource
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-id: placeholder
-
-host:
- host_id: XX1
- host_species: http://purl.obolibrary.org/obo/NCBITaxon_9606
- host_sex: http://purl.obolibrary.org/obo/NCIT_C27993
- host_age: 20
- host_age_unit: http://purl.obolibrary.org/obo/UO_0000036
- host_health_status: http://purl.obolibrary.org/obo/NCIT_C25269
- host_treatment: Process in which the act is intended to modify or alter host status (Compounds)
- host_vaccination: List of vaccines given to the host (RRIDs?)
- additional_host_information: Field for additional host information
-
-sample:
- sample_id: Id of the sample as defined by the submitter
- collector_name: Name of the person that took the sample
- collecting_institution: Institute that was responsible of sampling
- specimen_source: http://purl.obolibrary.org/obo/NCIT_C155831
- specimen_source2: http://purl.obolibrary.org/obo/NCIT_C155835
- collection_date: "2020-01-01"
- collection_location: http://www.wikidata.org/entity/Q148
- sample_storage_conditions: XXX
- additional_collection_information: XXX
-
-virus:
- virus_species: http://purl.obolibrary.org/obo/NCBITaxon_2697049
- virus_strain: SARS-CoV-2/human/CHN/HS_8/2020
-
-technology:
- sample_sequencing_technology: http://www.ebi.ac.uk/efo/EFO_0009173
- sample_sequencing_technology2: http://www.ebi.ac.uk/efo/EFO_0009173
- sequence_assembly_method: Protocol used for assembly
- sequencing_coverage: 70
-
-submitter:
- submitter_name: John Doe
- submitter_address: John Doe's adress
- originating_lab: John Doe kitchen
- lab_address: John Doe's address
- provider_sample_id: HmX
- submitter_sample_id: xXx
- authors: John Doe et all
- submitter_orcid: https://orcid.org/0000-0000-0000-0000 \ No newline at end of file