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| author | Pjotr Prins | 2020-07-21 07:52:13 +0100 |
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| committer | Pjotr Prins | 2020-07-21 07:52:13 +0100 |
| commit | 2e96d0d87abd6357868114b0b59ee66b08985235 (patch) | |
| tree | ddf38f6dca5f5a9ae69b430693ef0d1e64193ff5 /doc/web/export.org | |
| parent | c5b337fb20790fad3ae3e7a4c2928081de1c98ba (diff) | |
| download | bh20-seq-resource-2e96d0d87abd6357868114b0b59ee66b08985235.tar.gz bh20-seq-resource-2e96d0d87abd6357868114b0b59ee66b08985235.tar.lz bh20-seq-resource-2e96d0d87abd6357868114b0b59ee66b08985235.zip | |
Documenting exports and REST API
Diffstat (limited to 'doc/web/export.org')
| -rw-r--r-- | doc/web/export.org | 32 |
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diff --git a/doc/web/export.org b/doc/web/export.org new file mode 100644 index 0000000..aa7d680 --- /dev/null +++ b/doc/web/export.org @@ -0,0 +1,32 @@ +#+TITLE: About/FAQ +#+AUTHOR: Pjotr Prins + +* Table of Contents :TOC:noexport: + - [[#export-data][Export data]] + - [[#sparql-api][SPARQL API]] + - [[#rest-api][REST API]] + - [[#export-ebiena-forms][Export EBI/ENA Forms]] + +* Export data + +Apart from straight file [[http://covid19.genenetwork.org/download][downloads]] COVID-19 PubSeq allows for +exporting forms and data for other services. + +* SPARQL API + + +First of all, PubSeq exports a SPARQL endpoint [[http://sparql.genenetwork.org/sparql/][here]] that allows you do +do any query on the data. See this [[http://covid19.genenetwork.org/blog?id=using-covid-19-pubseq-part1][document]] for examples. + +* REST API + +In addition to above flexible SPARQL endpoint - which is essentially +is a query REST API - PubSeq exports its own +[[http://covid19.genenetwork.org/apidoc][REST API]]. + +* Export EBI/ENA Forms + +Uploading data to EBI/ENA with PubSeq is described [[http://covid19.genenetwork.org/blog?id=using-covid-19-pubseq-part6][here]]. + +To export, +first search for an uploaded entry through its identifier: |