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| author | Pjotr Prins | 2020-07-16 13:00:24 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2020-07-16 13:00:24 +0100 |
| commit | 375df836387d11bbe1fa0b1bce14eed24507a6d8 (patch) | |
| tree | 723e8e4205edac9f068ff9905a70a9008afe52e8 /doc/blog | |
| parent | f76e14fe7d737fc50ed19e6f4dbe3613b4004380 (diff) | |
| download | bh20-seq-resource-375df836387d11bbe1fa0b1bce14eed24507a6d8.tar.gz bh20-seq-resource-375df836387d11bbe1fa0b1bce14eed24507a6d8.tar.lz bh20-seq-resource-375df836387d11bbe1fa0b1bce14eed24507a6d8.zip | |
Blog: workflows
Diffstat (limited to 'doc/blog')
| -rw-r--r-- | doc/blog/using-covid-19-pubseq-part4.org | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/doc/blog/using-covid-19-pubseq-part4.org b/doc/blog/using-covid-19-pubseq-part4.org index 5fe71d1..8ad5e2d 100644 --- a/doc/blog/using-covid-19-pubseq-part4.org +++ b/doc/blog/using-covid-19-pubseq-part4.org @@ -10,6 +10,7 @@ * Table of Contents :TOC:noexport: - [[#what-does-this-mean][What does this mean?]] + - [[#where-can-i-find-the-workflows][Where can I find the workflows?]] - [[#modify-workflow][Modify Workflow]] * What does this mean? @@ -18,6 +19,11 @@ This means that when someone uploads a SARS-CoV-2 sequence using one of our tools (CLI or web-based) they add a sequence and some metadata which triggers a rerun of our workflows. +* Where can I find the workflows? + +Workflows are written in the common workflow language (CWL) and listed +on [[https://github.com/arvados/bh20-seq-resource/tree/master/workflows][github]]. PubSeq being an open project these workflows can be studied +and modified! * Modify Workflow |