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authorPjotr Prins2020-07-21 11:05:00 +0100
committerPjotr Prins2020-07-21 11:05:00 +0100
commitdceac420dffa3aa74ef49a50d9be01e450e9d339 (patch)
tree1d9e1d4f02c1b1b086494c6659d2fff06c77547e /bh20simplewebuploader/templates
parent56b5c444fd10cc569c4c0d7b76d034799ce679f9 (diff)
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Add sequencer JSON/XML output
Diffstat (limited to 'bh20simplewebuploader/templates')
-rw-r--r--bh20simplewebuploader/templates/ebi-sample.xml4
1 files changed, 2 insertions, 2 deletions
diff --git a/bh20simplewebuploader/templates/ebi-sample.xml b/bh20simplewebuploader/templates/ebi-sample.xml
index 441e29e..0b6b39e 100644
--- a/bh20simplewebuploader/templates/ebi-sample.xml
+++ b/bh20simplewebuploader/templates/ebi-sample.xml
@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<SAMPLE_SET>
- <SAMPLE alias="{{ id }}" center_name="COVID-19 PubSeq">
+ <SAMPLE alias="{{ sampleid }}" center_name="COVID-19 PubSeq">
<TITLE>COVID-19 PubSeq Sample</TITLE>
<SAMPLE_NAME>
<TAXON_ID>2697049</TAXON_ID>
@@ -14,7 +14,7 @@
</SAMPLE_ATTRIBUTE>
<SAMPLE_ATTRIBUTE>
<TAG>sequencing method</TAG>
- <VALUE>{{ sequence_method }}</VALUE>
+ <VALUE>{{ sequencer }}</VALUE>
</SAMPLE_ATTRIBUTE>
<SAMPLE_ATTRIBUTE>
<TAG>collection date</TAG>