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authorPeter Amstutz2020-07-08 17:14:46 -0400
committerGitHub2020-07-08 17:14:46 -0400
commit6e0f9f18167377bac073d7715b89e7ddbf1fe72d (patch)
tree1b72a737b50e60346aefaf009ac2488d45c8abe0 /bh20simplewebuploader/templates/home.html
parent6fa25708b46a590be82a6b84266c0a3f25a0d890 (diff)
parente821857e7a9403739f321feb7418d33d6bd8b2c7 (diff)
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Merge pull request #92 from arvados/upload-download-status
Split upload tab. Add upload status tab. Also a bunch of QC and uploader improvements.
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+<!DOCTYPE html>
+<html>
+ {% include 'header.html' %}
+ <body>
+ {% include 'banner.html' %}
+ {% include 'menu.html' %}
+
+ <section>
+ <div class="intro">
+ <p>
+ Make your sequence
+ data <a href="https://en.wikipedia.org/wiki/FAIR_data">FAIR</a>. Upload
+ your SARS-CoV-2 sequence (FASTA or FASTQ
+ formats) with metadata (JSONLD) to
+ the <a href="/about">public sequence
+ resource</a>. The upload will trigger a
+ recompute with all available sequences into a
+ Pangenome available for
+ <a href="/download">download</a>!
+ </p>
+ <p>
+ Your uploaded sequence will automatically be
+ processed and incorporated into the public
+ pangenome with metadata using worklows from
+ the High Performance Open Biology Lab
+ defined <a href="https://github.com/hpobio-lab/viral-analysis/tree/master/cwl/pangenome-generate">here</a>. All
+ data is published under
+ a <a href="https://creativecommons.org/licenses/by/4.0/">Creative
+ Commons license</a> You can take the published
+ (GFA/RDF/FASTA) data and store it in a triple
+ store for further processing. Clinical
+ data can be stored
+ securely
+ at <a href="https://redcap-covid19.elixir-luxembourg.org/redcap/">REDCap</a>.
+ </p>
+ <p>
+ Note that form fields contain
+ web <a href="https://en.wikipedia.org/wiki/Web_Ontology_Language">ontology
+ URI's</a>
+ for <a href="https://en.wikipedia.org/wiki/Wikipedia:Disambiguation">disambiguation</a>
+ and machine readable metadata. For examples of
+ use, see the <a href="/blog">BLOG</a>.
+ </p>
+ </div>
+ </section>
+
+{% include 'footer.html' %}
+
+ </body>
+</html>