aboutsummaryrefslogtreecommitdiff
path: root/bh20simplewebuploader/main.py
diff options
context:
space:
mode:
authorlltommy2020-06-11 18:43:54 +0200
committerlltommy2020-06-11 18:43:54 +0200
commit2448b39a9fc3ab910fa4005196688b3f75be41ce (patch)
treed8b8c61370affd319c92115da3eb7f45241583fe /bh20simplewebuploader/main.py
parent39eca644ed4a0a86510ae0b8afb8da9207d9750a (diff)
downloadbh20-seq-resource-2448b39a9fc3ab910fa4005196688b3f75be41ce.tar.gz
bh20-seq-resource-2448b39a9fc3ab910fa4005196688b3f75be41ce.tar.lz
bh20-seq-resource-2448b39a9fc3ab910fa4005196688b3f75be41ce.zip
Fixing #65 and adding additional country information
Diffstat (limited to 'bh20simplewebuploader/main.py')
-rw-r--r--bh20simplewebuploader/main.py4
1 files changed, 2 insertions, 2 deletions
diff --git a/bh20simplewebuploader/main.py b/bh20simplewebuploader/main.py
index 81fe571..0cc22df 100644
--- a/bh20simplewebuploader/main.py
+++ b/bh20simplewebuploader/main.py
@@ -493,12 +493,12 @@ def getAllaccessions():
# parameter must be encoded e.g. http://arvados.org/keep:6e6276698ed8b0e6cd21f523e4f91179+123/sequence.fasta must become
-# http%3A%2F%2Farvados.org%2Fkeep%3A6e6276698ed8b0e6cd21f523e4f91179%2B123%2Fsequence.fasta
+# http%3A%2F%2Fcollections.lugli.arvadosapi.com%2Fc%3D00a6af865453564f6a59b3d2c81cc7c1%2B123%2Fsequence.fasta
@app.route('/api/getDetailsForSeq', methods=['GET'])
def getDetailsForSeq():
seq_id = request.args.get('seq')
query="""SELECT DISTINCT ?key ?key_label ?value WHERE {
- <http://arvados.org/keep:00a6af865453564f6a59b3d2c81cc7c1+123/sequence.fasta> ?x [?key ?value] .
+ <placeholder> ?x [?key ?value] .
OPTIONAL {?key <http://www.w3.org/2000/01/rdf-schema#label> ?key_tmp_label } .
BIND(IF(BOUND(?key_tmp_label),?key_tmp_label, ?key) as ?key_label)}"""
query=query.replace("placeholder", seq_id)