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| author | lltommy | 2020-04-18 19:11:57 +0200 |
|---|---|---|
| committer | lltommy | 2020-04-18 19:11:57 +0200 |
| commit | bbca5ac9b2538e410efe3e09651f87e5573145de (patch) | |
| tree | 0f120edbc392a72c0d6a3797f0a1c0dd7370293a /bh20sequploader/supporting_webuploader.yml | |
| parent | 7cf44a7aed6dd190e16ac94958aefcf7bffed6a0 (diff) | |
| download | bh20-seq-resource-bbca5ac9b2538e410efe3e09651f87e5573145de.tar.gz bh20-seq-resource-bbca5ac9b2538e410efe3e09651f87e5573145de.tar.lz bh20-seq-resource-bbca5ac9b2538e410efe3e09651f87e5573145de.zip | |
Extending yaml schema a bit and adding additional information for the UI
Diffstat (limited to 'bh20sequploader/supporting_webuploader.yml')
| -rw-r--r-- | bh20sequploader/supporting_webuploader.yml | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/bh20sequploader/supporting_webuploader.yml b/bh20sequploader/supporting_webuploader.yml index 6b8946f..3650526 100644 --- a/bh20sequploader/supporting_webuploader.yml +++ b/bh20sequploader/supporting_webuploader.yml @@ -10,6 +10,34 @@ host_sex: Female: http://purl.obolibrary.org/obo/NCIT_C27993 unknown: http://purl.obolibrary.org/obo/NCIT_C17998 +sample_sequencing_technology: + Illumina NextSeq 500: http://www.ebi.ac.uk/efo/EFO_0009173 + Oxford Nanopore MinION: http://www.ebi.ac.uk/efo/EFO_0008632 + Illumina MiSeq: http://www.ebi.ac.uk/efo/EFO_0004205 + IonTorrent: http://purl.obolibrary.org/obo/NCIT_C125894 + Oxford Nanopore Sequencing: http://purl.obolibrary.org/obo/NCIT_C146818 + Sanger dideoxy sequencing: http://purl.obolibrary.org/obo/NCIT_C19641 + +sample_sequencing_technology2: + Illumina NextSeq 500: http://www.ebi.ac.uk/efo/EFO_0009173 + Oxford Nanopore MinION: http://www.ebi.ac.uk/efo/EFO_0008632 + Illumina MiSeq: http://www.ebi.ac.uk/efo/EFO_0004205 + IonTorrent: http://purl.obolibrary.org/obo/NCIT_C125894 + Oxford Nanopore Sequencing: http://purl.obolibrary.org/obo/NCIT_C146818 + Sanger dideoxy sequencing: http://purl.obolibrary.org/obo/NCIT_C19641 + +specimen_source: + nasopharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155831 + oropharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155835 + sputum: http://purl.obolibrary.org/obo/NCIT_C13278 + bronchoalveolar lavage fluid: http://purl.obolibrary.org/obo/NCIT_C13195 + +specimen_source2: + nasopharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155831 + oropharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155835 + sputum: http://purl.obolibrary.org/obo/NCIT_C13278 + bronchoalveolar lavage fluid: http://purl.obolibrary.org/obo/NCIT_C13195 + host_species: OLS-ontology: ncbitaxon |