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| author | Adam Novak | 2020-04-09 15:57:37 -0700 |
|---|---|---|
| committer | Adam Novak | 2020-04-09 15:58:56 -0700 |
| commit | d9a24cfb81a028fcd901abd08fc02b9140d5e78b (patch) | |
| tree | b08ac8d559a263381703ce14c06e144e6f48912c /bh20sequploader/qc_metadata.py | |
| parent | 2cd6623aa0ddfe4e42b2d434e0523773bb3536ef (diff) | |
| parent | b1039ff369ee88770e42d1bbbdc402b1181c2aa5 (diff) | |
| download | bh20-seq-resource-d9a24cfb81a028fcd901abd08fc02b9140d5e78b.tar.gz bh20-seq-resource-d9a24cfb81a028fcd901abd08fc02b9140d5e78b.tar.lz bh20-seq-resource-d9a24cfb81a028fcd901abd08fc02b9140d5e78b.zip | |
Merge remote-tracking branch 'upstream/master' into add-web-ui
Diffstat (limited to 'bh20sequploader/qc_metadata.py')
| -rw-r--r-- | bh20sequploader/qc_metadata.py | 6 |
1 files changed, 4 insertions, 2 deletions
diff --git a/bh20sequploader/qc_metadata.py b/bh20sequploader/qc_metadata.py index 78b31b2..ebe4dfc 100644 --- a/bh20sequploader/qc_metadata.py +++ b/bh20sequploader/qc_metadata.py @@ -1,6 +1,7 @@ import schema_salad.schema import logging import pkg_resources +import logging def qc_metadata(metadatafile): schema_resource = pkg_resources.resource_stream(__name__, "bh20seq-schema.yml") @@ -17,5 +18,6 @@ def qc_metadata(metadatafile): try: doc, metadata = schema_salad.schema.load_and_validate(document_loader, avsc_names, metadatafile, True) return True - except: - return False + except Exception as e: + logging.warn(e) + return False |