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| author | LLTommy | 2020-04-23 20:18:36 +0200 |
|---|---|---|
| committer | GitHub | 2020-04-23 20:18:36 +0200 |
| commit | 7049cd5d29acd601ccbbc9d04f001b84a51e9bd5 (patch) | |
| tree | 34a1254d81c2e526427fedb1deaa9f8441e8b260 /bh20sequploader/main.py | |
| parent | f38b9c6f22b82327df9648938a5a4bcf863d8c41 (diff) | |
| parent | c7612e7eda5cd38bfbb2d293bebf732893a41b6c (diff) | |
| download | bh20-seq-resource-7049cd5d29acd601ccbbc9d04f001b84a51e9bd5.tar.gz bh20-seq-resource-7049cd5d29acd601ccbbc9d04f001b84a51e9bd5.tar.lz bh20-seq-resource-7049cd5d29acd601ccbbc9d04f001b84a51e9bd5.zip | |
Merge branch 'master' into patch-3
Diffstat (limited to 'bh20sequploader/main.py')
| -rw-r--r-- | bh20sequploader/main.py | 8 |
1 files changed, 5 insertions, 3 deletions
diff --git a/bh20sequploader/main.py b/bh20sequploader/main.py index 49d012d..4c4711d 100644 --- a/bh20sequploader/main.py +++ b/bh20sequploader/main.py @@ -44,7 +44,8 @@ def main(): with col.open(target, "w") as f: r = args.sequence.read(65536) - print(r[0:20]) + seqlabel = r[1:r.index("\n")] + print(seqlabel) while r: f.write(r) r = args.sequence.read(65536) @@ -62,13 +63,14 @@ def main(): external_ip = urllib.request.urlopen('https://ident.me').read().decode('utf8') properties = { + "sequence_label": seqlabel, "upload_app": "bh20-seq-uploader", "upload_ip": external_ip, "upload_user": "%s@%s" % (getpass.getuser(), socket.gethostname()) } - col.save_new(owner_uuid=UPLOAD_PROJECT, name="Uploaded by %s from %s" % - (properties['upload_user'], properties['upload_ip']), + col.save_new(owner_uuid=UPLOAD_PROJECT, name="%s uploaded by %s from %s" % + (seqlabel, properties['upload_user'], properties['upload_ip']), properties=properties, ensure_unique_name=True) print("Done") |