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| author | lltommy | 2020-04-30 18:00:58 +0200 |
|---|---|---|
| committer | lltommy | 2020-04-30 18:00:58 +0200 |
| commit | 5c05facbdb1e35556256cd11d6a814822ebb6159 (patch) | |
| tree | fb045d0d1dd1240b45ab50568187e748c288c118 /bh20sequploader/bh20seq-schema.yml | |
| parent | 89c6d6a65d4a8f21476bfe7df2eabbcca6aba129 (diff) | |
| download | bh20-seq-resource-5c05facbdb1e35556256cd11d6a814822ebb6159.tar.gz bh20-seq-resource-5c05facbdb1e35556256cd11d6a814822ebb6159.tar.lz bh20-seq-resource-5c05facbdb1e35556256cd11d6a814822ebb6159.zip | |
Last addition/edits to the meta data schema
Diffstat (limited to 'bh20sequploader/bh20seq-schema.yml')
| -rw-r--r-- | bh20sequploader/bh20seq-schema.yml | 15 |
1 files changed, 12 insertions, 3 deletions
diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml index d3e992a..99e1a11 100644 --- a/bh20sequploader/bh20seq-schema.yml +++ b/bh20sequploader/bh20seq-schema.yml @@ -49,6 +49,7 @@ $graph: jsonldPredicate: _id: http://purl.obolibrary.org/obo/NCIT_C25688 _type: "@id" + noLinkCheck: true host_treatment: doc: Process in which the act is intended to modify or alter host status type: string? @@ -59,6 +60,13 @@ $graph: type: string[]? jsonldPredicate: _id: http://purl.obolibrary.org/obo/VO_0000002 + ethnicity: + doc: Ethinicity of the host e.g. http://purl.obolibrary.org/obo/HANCESTRO_0010 + type: string? + jsonldPredicate: + _id: http://semanticscience.org/resource/SIO_001014 + _type: "@id" + noLinkCheck: true additional_host_information: doc: Field for additional host information type: string? @@ -91,7 +99,7 @@ $graph: jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0001895 collecting_institution: - doc: Institute that was responsible of sampeling + doc: Institute that was responsible for sampeling type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/NCIT_C41206 @@ -118,12 +126,13 @@ $graph: jsonldPredicate: _id: http://edamontology.org/data_2091 _type: "@id" + noLinkCheck: true - name: virusSchema type: record fields: virus_species: - doc: The name of a taxon from the NCBI taxonomy database + doc: The name of virus species from the NCBI taxonomy database, e.g. http://purl.obolibrary.org/obo/NCBITaxon_2697049 for Severe acute respiratory syndrome coronavirus 2 type: string jsonldPredicate: _id: http://edamontology.org/data_1875 @@ -152,7 +161,7 @@ $graph: _id: http://www.ebi.ac.uk/efo/EFO_0002699 sequencing_coverage: doc: Sequence coverage defined as the average number of reads representing a given nucleotide (e.g. [100]) - if multiple technologies were used multiple float values can be submitted e.g. [100, 20] - type: float[]? + type: double[]? jsonldPredicate: _id: http://purl.obolibrary.org/obo/FLU_0000848 additional_technology_information: |