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authorLLTommy2020-04-23 20:18:36 +0200
committerGitHub2020-04-23 20:18:36 +0200
commit7049cd5d29acd601ccbbc9d04f001b84a51e9bd5 (patch)
tree34a1254d81c2e526427fedb1deaa9f8441e8b260 /bh20sequploader/bh20seq-options.yml
parentf38b9c6f22b82327df9648938a5a4bcf863d8c41 (diff)
parentc7612e7eda5cd38bfbb2d293bebf732893a41b6c (diff)
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Merge branch 'master' into patch-3
Diffstat (limited to 'bh20sequploader/bh20seq-options.yml')
-rw-r--r--bh20sequploader/bh20seq-options.yml9
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diff --git a/bh20sequploader/bh20seq-options.yml b/bh20sequploader/bh20seq-options.yml
index 7320ecf..4c1d15c 100644
--- a/bh20sequploader/bh20seq-options.yml
+++ b/bh20sequploader/bh20seq-options.yml
@@ -15,6 +15,15 @@ host_sex:
Female: http://purl.obolibrary.org/obo/PATO_0000383
Intersex: http://purl.obolibrary.org/obo/PATO_0001340
+host_health_status:
+ healthy: http://purl.obolibrary.org/obo/NCIT_C115935
+ asymptomatic: http://purl.obolibrary.org/obo/NCIT_C3833
+ sympotmatic: http://purl.obolibrary.org/obo/NCIT_C25269
+ admitted to hospital: http://purl.obolibrary.org/obo/GENEPIO_0002020
+ discharged from hospital: http://purl.obolibrary.org/obo/GENEPIO_0001849
+ dead: http://purl.obolibrary.org/obo/NCIT_C28554
+ alive: http://purl.obolibrary.org/obo/NCIT_C37987
+
sample_sequencing_technology:
Illumina NextSeq 500: http://www.ebi.ac.uk/efo/EFO_0009173
Illumina NextSeq 550: http://www.ebi.ac.uk/efo/EFO_0008566