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| author | Pjotr Prins | 2020-05-06 09:03:08 -0500 |
|---|---|---|
| committer | Pjotr Prins | 2020-05-06 09:03:08 -0500 |
| commit | 0031e778ee1ad8b934411da5082fcb3115646e67 (patch) | |
| tree | be17fb9aff6351e967a9210cd4c58a60ad55a382 /bh20seqanalyzer | |
| parent | 7d7af6cde75d09da7a05cf5bc05ef2556c3aea92 (diff) | |
| parent | b6d846b5de6c67b28adab1fa520953115a1a1e30 (diff) | |
| download | bh20-seq-resource-0031e778ee1ad8b934411da5082fcb3115646e67.tar.gz bh20-seq-resource-0031e778ee1ad8b934411da5082fcb3115646e67.tar.lz bh20-seq-resource-0031e778ee1ad8b934411da5082fcb3115646e67.zip | |
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Diffstat (limited to 'bh20seqanalyzer')
| -rw-r--r-- | bh20seqanalyzer/main.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/bh20seqanalyzer/main.py b/bh20seqanalyzer/main.py index 8d0f562..07e5f69 100644 --- a/bh20seqanalyzer/main.py +++ b/bh20seqanalyzer/main.py @@ -90,7 +90,6 @@ def run_workflow(api, parent_project, workflow_uuid, name, inputobj): cmd = ["arvados-cwl-runner", "--submit", "--no-wait", - "--debug", "--project-uuid=%s" % project["uuid"], "arvwf:%s" % workflow_uuid, tmp.name] @@ -137,6 +136,7 @@ def start_pangenome_analysis(api, "location": schema_ref } } + validated.sort(key=lambda v: v["portable_data_hash"]) for v in validated: inputobj["inputReads"].append({ "class": "File", |