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| author | Andrea Guarracino | 2020-06-22 23:38:22 +0200 |
|---|---|---|
| committer | GitHub | 2020-06-22 23:38:22 +0200 |
| commit | 2d822c049f2b7f3e62a3ac4c19c827428b6f73e2 (patch) | |
| tree | 847268e1194586a628836d03f897a54722e9b1da | |
| parent | 640675e07505dc0f7969480fe0643653e6408ec2 (diff) | |
| download | bh20-seq-resource-2d822c049f2b7f3e62a3ac4c19c827428b6f73e2.tar.gz bh20-seq-resource-2d822c049f2b7f3e62a3ac4c19c827428b6f73e2.tar.lz bh20-seq-resource-2d822c049f2b7f3e62a3ac4c19c827428b6f73e2.zip | |
very little readme for the scripts
| -rw-r--r-- | scripts/README.md | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/scripts/README.md b/scripts/README.md new file mode 100644 index 0000000..a3ed1b6 --- /dev/null +++ b/scripts/README.md @@ -0,0 +1,6 @@ +### Instructions for download and/or prepare the data and/ or the metadata + +Just go into the `download_genbank_data` or `download_sra_data` directory and execute the python3 script inside. + +- `download_genbank_data/from_genbank_to_fasta_and_yaml.py` downloads the data and the matadata, preparing the FASTA and the YAML files; +- `download_sra_data/download_sra_data.py` creates the metadata in the form of YAML files from the SraExperimentPackage.XXX.xml.gz file in the same directory. |