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|
- id: hello-world
doc: Hello world!
tool: tools/hello-world.cwl
job: jobs/hello-world.yaml
output:
output_message:
class: File
size: 13
checksum: sha1$47a013e660d408619d894b20806b1d5086aab03b
- id: capture-output-file
doc: Capture output file using a glob
tool: tools/capture-output-file.cwl
job: jobs/capture-output-file.yaml
output:
extracted_file:
class: File
basename: hello.txt
nameroot: hello
nameext: .txt
size: 13
checksum: sha1$a0b65939670bc2c010f4d5d6a0b3e4e4590fb92b
- id: capture-output-file-with-parameter-reference
doc: Capture output file using a glob and a parameter reference
tool: tools/capture-output-file-with-parameter-reference.cwl
job: jobs/capture-output-file-with-parameter-reference.yaml
output:
extracted_file:
class: File
basename: hello.txt
nameroot: hello
nameext: .txt
size: 13
checksum: sha1$a0b65939670bc2c010f4d5d6a0b3e4e4590fb92b
- id: capture-stdout
doc: Capture standard output as a file
tool: tools/capture-stdout.cwl
job: jobs/hello-world.yaml
output:
printed_message:
class: File
basename: printed-message-output.txt
nameroot: printed-message-output
nameext: .txt
size: 13
checksum: sha1$47a013e660d408619d894b20806b1d5086aab03b
- id: checksum
doc: Compute several hashes
tool: tools/checksum.cwl
job: jobs/checksum.yaml
output:
md5:
class: File
basename: md5
nameroot: md5
nameext: ""
size: 44
checksum: sha1$9fa7df2256ce2e726bd9e89485d596b9985971a7
sha1:
class: File
basename: sha1
nameroot: sha1
nameext: ""
size: 52
checksum: sha1$5beabf5a3d41d2c4a494d4342419894d9d7800e0
sha256:
class: File
basename: sha256
nameroot: sha256
nameext: ""
size: 76
checksum: sha1$1d4d44c8563d8e5279dd8d0eb1e3e599c7c3ef3f
- id: decompress-compile-run
doc: Decompress a compressed C source file, compile and run it
tool: tools/decompress-compile-run.cwl
job: jobs/decompress-compile-run.yaml
output:
stdout:
class: File
basename: run-output.txt
nameroot: run-output
nameext: .txt
size: 13
checksum: sha1$a0b65939670bc2c010f4d5d6a0b3e4e4590fb92b
- id: inline-javascript-requirement
doc: Run javascript for InlineJavascriptRequirement
tool: tools/inline-javascript-requirement.cwl
job: jobs/inline-javascript-requirement.yaml
output:
sum:
class: File
size: 3
checksum: sha1$030514d80869744a4e2f60d2fd37d6081f5ed01a
- id: pass-stdin
doc: Pass standard input into command
tool: tools/pass-stdin.cwl
job: jobs/checksum.yaml
output:
bytes:
class: File
size: 6
checksum: sha1$0929a71b2f03c579afed345f79635816595c2041
- id: prefix-arguments
doc: Command with prefix arguments
tool: tools/prefix-arguments.cwl
job: jobs/prefix-arguments.yaml
output:
sequence:
class: File
size: 21
checksum: sha1$474f936f3e4a4db3f01ee46f9fa8fc928a07c2ab
- id: scatter
doc: Workflow with a scattering step
tool: tools/scatter.cwl
job: jobs/scatter.yaml
output:
printed_output:
- class: File
size: 8
checksum: sha1$d53a205a336e07cf9eac45471b3870f9489288ec
- class: File
size: 11
checksum: sha1$f784299d4fcaf81aba0b0647264a959fdfe8180d
- class: File
size: 11
checksum: sha1$b7ee58e14913c07256e9255e69310ddcde4bdb51
- id: spell-check
doc: Spell-check workflow using Unix utilities
tool: tools/spell-check.cwl
job: jobs/spell-check.yaml
output:
misspellings:
class: File
basename: misspelt-words
size: 6
checksum: sha1$e701a33e7681ea185a709168c44e13217497d220
- id: staging-input-files
doc: Stage input files to working directory
tool: tools/staging-input-files.cwl
job: jobs/staging-input-files.yaml
output:
output_file:
class: File
size: 76
checksum: sha1$a43e1394643339f6a203147ccbf82cc3be1777e0
- id: command-line-tool-with-default-input
doc: CommandLineTool with default input
tool: tools/command-line-tool-with-default-input.cwl
job: jobs/empty.yaml
output:
output_message:
class: File
size: 13
checksum: sha1$47a013e660d408619d894b20806b1d5086aab03b
- id: command-line-tool-step-with-default-input
doc: CommandLineTool step with default input
tool: tools/command-line-tool-step-with-default-input.cwl
job: jobs/empty.yaml
output:
output_message:
class: File
size: 13
checksum: sha1$47a013e660d408619d894b20806b1d5086aab03b
- id: command-line-tool-step-with-optional-and-required-inputs
doc: CommandLineTool step with optional and required inputs
tool: tools/command-line-tool-step-with-optional-and-required-inputs.cwl
job: jobs/hello-world.yaml
output:
output_message:
class: File
size: 26
checksum: sha1$2544f363c82bf304dc363829620ecf213e1a2c1e
- id: workflow-with-default-input
doc: Workflow with default input
tool: tools/workflow-with-default-input.cwl
job: jobs/empty.yaml
output:
output_message:
class: File
size: 13
checksum: sha1$47a013e660d408619d894b20806b1d5086aab03b
- id: workflow-step-with-default-input
doc: Workflow step with default input
tool: tools/workflow-step-with-default-input.cwl
job: jobs/empty.yaml
output:
output_message:
class: File
size: 13
checksum: sha1$47a013e660d408619d894b20806b1d5086aab03b
- id: workflow-step-with-optional-and-required-inputs
doc: Workflow step with optional and required inputs
tool: tools/workflow-step-with-optional-and-required-inputs.cwl
job: jobs/hello-world.yaml
output:
output_message:
class: File
size: 26
checksum: sha1$2544f363c82bf304dc363829620ecf213e1a2c1e
|
