pyhegp - Homomorphic encryption of genotypes and phenotypes

Age	Commit message (Collapse)	Author
2025-09-05	Generate unique SNPs in genotype frames without dropping duplicates.	Arun Isaac
	Earlier, we were generating unique SNPs in genotype frames by dropping duplicates. This meant we couldn't control the number of SNPs. Rejection sampling is also not an option because it is too expensive. So, we now generate unique SNPs directly, by first generating a list with unique elements and then converting to a data frame.
2025-09-05	Deduplicate genotype frame metadata generation.	Arun Isaac
	Abstract out generation of genotype frame metadata (namely chromosome, position and reference) from summaries and genotype_frames into a new helper function genotype_metadata.
2025-09-04	Limit values in genotype and phenotype strategies.	Arun Isaac

2025-09-04	Parameterize number of samples in phenotype frame strategy.	Arun Isaac

2025-09-04	Parameterize number of samples in genotype frame strategy.	Arun Isaac

2025-09-04	Parameterize presence of reference column in genotype frame strategy.	Arun Isaac

2025-09-04	Add keys strategy.	Arun Isaac
	Add keys strategy, and use it.
2025-09-02	Add is_phenotype_metadata_column.	Arun Isaac
	Promote phenotype_reserved_column_name_p from helpers.strategies to is_phenotype_metadata_column in pyhegp.serialization.
2025-09-02	Drop duplicates in generated test phenotype frames.	Arun Isaac

2025-09-02	Add is_genotype_metadata_column.	Arun Isaac
	Promote genotype_reserved_column_name_p from helpers.strategies to is_genotype_metadata_column in pyhegp.serialization, and use it everywhere.
2025-09-02	Drop duplicates in generated test genotype frames.	Arun Isaac

2025-09-02	Move hypothesis strategies to separate file.	Arun Isaac
	These strategies may be used by other test modules as well.