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authorArun Isaac2025-09-06 18:16:28 +0100
committerArun Isaac2025-09-06 18:49:49 +0100
commitb89ecd37fe19fdb31beebabd2796b74f5dc97743 (patch)
treea5cd342fcf4cae262a2483f099198908260f44e7 /.guix-channel
parent9905a9ff160ae4688815640cc4e669c5fdfe3273 (diff)
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Add end-to-end tests for hsmice dataset.
* Add hsmice dataset wrangling and test scripts.
* Add G-expression script to run test.
* Depend on the guix-bioinformatics Guix channel for r-genio.
Diffstat (limited to '.guix-channel')
-rw-r--r--.guix-channel19
1 files changed, 18 insertions, 1 deletions
diff --git a/.guix-channel b/.guix-channel
index 35e181f..f76e5dd 100644
--- a/.guix-channel
+++ b/.guix-channel
@@ -1,3 +1,20 @@
 (channel
  (version 0)
- (directory ".guix"))
+ (directory ".guix")
+ (dependencies
+  (channel
+   (name guix-bioinformatics)
+   (url "https://git.genenetwork.org/guix-bioinformatics"))
+  ;; Unfortunately, Guix suffers from an open bug whereby channel
+  ;; dependencies are not resolved recursively. Hence, we must depend
+  ;; on the guix-past channel explicitly. See
+  ;; https://issues.guix.gnu.org/68797 for details.
+  (channel
+   (name guix-past)
+   (url "https://codeberg.org/guix-science/guix-past")
+   (introduction
+    (channel-introduction
+     (version 0)
+     (commit "0c119db2ea86a389769f4d2b9c6f5c41c027e336")
+     (signer
+      "3CE4 6455 8A84 FDC6 9DB4  0CFB 090B 1199 3D9A EBB5"))))))