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;;; domagi --- DuckDB-powered pangenome Swiss Army knife
;;; Copyright © 2026 Arun Isaac <arunisaac@systemreboot.net>
;;;
;;; This file is part of domagi.
;;;
;;; domagi is free software: you can redistribute it and/or modify it under the
;;; terms of the GNU General Public License as published by the Free Software
;;; Foundation, either version 3 of the License, or (at your option) any later
;;; version.
;;;
;;; domagi is distributed in the hope that it will be useful, but WITHOUT ANY
;;; WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
;;; FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
;;; details.
;;;
;;; You should have received a copy of the GNU General Public License along with
;;; domagi. If not, see <https://www.gnu.org/licenses/>.
(define-module (domagi-package)
#:use-module ((gnu packages check) #:select (python-pytest))
#:use-module ((gnu packages cmake) #:select (cmake))
#:use-module ((gnu packages datastructures) #:select (verstable))
#:use-module ((gnu packages duckdb) #:select (duckdb python-duckdb))
#:use-module ((gnu packages pkg-config) #:select (pkg-config))
#:use-module ((gnu packages python-xyz) #:select (python-click python-meson))
#:use-module (guix build-system pyproject)
#:use-module (guix gexp)
#:use-module (guix git-download)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix utils))
(define-public domagi
(package
(name "domagi")
(version "0.1.0")
(source (local-file ".."
"domagi-checkout"
#:recursive? #t
#:select? (or (git-predicate (dirname (current-source-directory)))
(const #t))))
(build-system pyproject-build-system)
(inputs
(list duckdb
python-click
python-duckdb))
(native-inputs
(list cmake
python-meson
pkg-config
python-pytest
verstable))
(home-page "https://github.com/arunisaac/domagi")
(synopsis "DuckDB-powered pangenome Swiss Army knife")
(description "domagi is a DuckDB-powered clone of odgi, the pangenome
manipulation tool.")
(license license:gpl3+)))
domagi
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