blob: a70e3e0dd8616c3a1ffa7e2da84d386bdb3cd04f (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
|
;;; ccwl --- Concise Common Workflow Language
;;; Copyright © 2021, 2023–2024 Arun Isaac <arunisaac@systemreboot.net>
;;;
;;; This file is part of ccwl.
;;;
;;; ccwl is free software: you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation, either version 3 of the License, or
;;; (at your option) any later version.
;;;
;;; ccwl is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
;;; General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with ccwl. If not, see <https://www.gnu.org/licenses/>.
(define-module (ccwl-package)
#:use-module ((gnu packages bioinformatics) #:prefix guix:)
#:use-module ((gnu packages emacs) #:select (emacs-minimal))
#:use-module ((gnu packages fonts) #:select (font-charter font-fira-code))
#:use-module ((guix build-system guile) #:select (%guile-build-system-modules))
#:use-module (guix gexp)
#:use-module (guix git-download)
#:use-module (guix packages)
#:use-module (guix profiles)
#:use-module (guix utils))
(define-public ccwl
(package
(inherit guix:ccwl)
(source (local-file ".."
"ccwl-checkout"
#:recursive? #t
#:select? (or (git-predicate (dirname (current-source-directory)))
(const #t))))))
(define ccwl-website-gexp
(let ((development-profile
(profile
(content (package->development-manifest ccwl))
(allow-collisions? #t))))
(with-imported-modules %guile-build-system-modules
#~(begin
(use-modules (guix build guile-build-system)
(guix build utils))
(set-path-environment-variable
"PATH" (list "/bin") (list #$development-profile #$emacs-minimal))
(set-path-environment-variable
"LIBRARY_PATH" (list "/lib") (list #$development-profile))
(set-path-environment-variable
"GUILE_LOAD_PATH"
(list (string-append "/share/guile/site/"
(target-guile-effective-version)))
(list #$development-profile))
(set-path-environment-variable
"GUILE_LOAD_COMPILED_PATH"
(list (string-append "/lib/guile/" (target-guile-effective-version) "/site-ccache"))
(list #$development-profile))
(copy-recursively #$(package-source ccwl)
(getcwd))
;; Emacs modifies README.org presumably for the contained
;; org dynamic block. So, grant write permissions.
(chmod "README.org" #o644)
(for-each patch-shebang
(list "pre-inst-env"
"build-aux/generate-cwl-output.sh"
"scripts/ccwl"))
(substitute* "Makefile"
(("\\$\\(GUIX_ENVIRONMENT\\)")
#$(profile
(content (packages->manifest (list font-charter font-fira-code))))))
(invoke "sh" "configure")
(invoke "make"
"--jobs" (number->string (parallel-job-count)))
(invoke "make" "website"
"--jobs" (number->string (parallel-job-count)))
(copy-recursively "website" #$output)))))
(define-public ccwl-website
(computed-file "ccwl-website" ccwl-website-gexp))
ccwl
|
