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path: root/bh20sequploader/validation_shape.rdf
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PREFIX : <http://whatever/>
PREFIX MainSchema: <http://biohackathon.org/bh20-seq-schema#MainSchema/>
PREFIX hostSchema: <http://biohackathon.org/bh20-seq-schema#hostSchema/>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX sio: <http://semanticscience.org/resource/>
PREFIX efo: <http://www.ebi.ac.uk/efo/>
PREFIX evs: <http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#>
PREFIX edam: <http://edamontology.org/>

:submissionShape {
  MainSchema:host   @:hostShape ;
  MainSchema:sample @:sampleShape ;
  MainSchema:submitter @:submitterShape ;
  MainSchema:technology @:technologyShape ;
  MainSchema:virus @:virusShape;
}

:hostShape  {
  	efo:EFO_0000532 [ obo:NCBITaxon_~ ] ;
    obo:PATO_0000047 [ obo:NCIT_C20197  obo:NCIT_C27993  obo:NCIT_C17998 ] ;
    sio:SIO_000115 xsd:string ;
    obo:PATO_0000011 xsd:integer ?;
    obo:NCIT_C42574 [ obo:UO_~ ] ?;
    sio:SIO_001167 xsd:string ?;
    efo:EFO_0000727 xsd:string ?;
}

:sampleShape  {
    obo:OBI_0001895 xsd:string ;
    sio:SIO_000115 xsd:string ;
    sio:SIO_001167 xsd:string ;
	evs:C25164 xsd:string ?;
    obo:GAZ_00000448 [obo:GAZ_~] ?;
    obo:OBI_0001472 xsd:string ?;
    obo:OBI_0001479 xsd:string ?;
}

:submitterShape {
    sio:SIO_000116 xsd:string ;
	obo:NCIT_C37984 xsd:string ;
	obo:NCIT_C37900 xsd:string ?;
    obo:NCIT_C42781 xsd:string ?;
    obo:OBI_0600047 xsd:string ?;
    sio:SIO_000115 /https:\u002F\u002Forcid.org\u002F.{4}-.{4}-.{4}-.{4}/?;
    sio:SIO_000172 xsd:string ?;
    efo:EFO_0001741 xsd:string ?;
}

:technologyShape {
    obo:OBI_0600047 xsd:string ;
    obo:FLU_0000848 xsd:integer ?;
    efo:EFO_0002699 xsd:string ?;
}

:virusShape{
	edam:data_1875 [ obo:NCBITaxon_~ ] ;
  	sio:SIO_010055 xsd:string ?;
}