bh20-seq-resource - Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis

Age	Commit message (Expand)	Author
2020-06-11	tweaks for proper graph browser output	Michael R. Crusoe
2020-06-02	update tool sub repo	Michael R. Crusoe
2020-05-26	Can have list of sequence labels to exclude from combined fasta	Peter Amstutz
2020-05-14	Workflow fixes	Peter Amstutz
2020-05-11	Merge pull request #49 from mr-c/add_pangenome_browser_prep	Peter Amstutz
2020-05-05	preserve the directory layout of segmentation.py	Michael R. Crusoe
2020-05-05	move some tools into the shared repo	Michael R. Crusoe
2020-05-04	bump jerven/spodgi image to 0.0.6	Peter Amstutz
2020-05-04	add pangenome browser prep	Michael R. Crusoe
2020-05-04	Increase RAM for minimap2	Peter Amstutz
2020-05-03	Set a RAM requirement on odgi_to_rdf to influence it to run on c5	Peter Amstutz
2020-05-01	Set verison tag on spodgi container image	Peter Amstutz
2020-04-28	Update spodgi docker image	Peter Amstutz
2020-04-21	Increase ram requirement for minimap2	Peter Amstutz
2020-04-21	Workaround CWL limit by chunking file list	Peter Amstutz
2020-04-21	Work around CWL content size limit by chunking	Peter Amstutz
2020-04-20	Add readsMergeDedup.fasta to output	Peter Amstutz
2020-04-20	Make sure there is a newline in relabeled fasta (but no blank lines)	Peter Amstutz
2020-04-20	Better handling of duplicate sequences	Peter Amstutz
2020-04-20	Relabel sequences to match metadata subjects.	Peter Amstutz
2020-04-20	Move workflows into main repo	Peter Amstutz