index
:
bh20-seq-resource
analysis-refactor
fasta-subset-from-query
generate-cwl
master
new_assembly_method_field
pangenome_workflow_abpoa
upload-download-status
uuid-for-resource
yamlfa2ttl
Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
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Author
2020-04-22
Small changes all around, trying to make the importer/metadata better
lltommy
2020-04-21
Tweak handling of "coverage" also fix typo
Peter Amstutz
2020-04-21
Working on NCBI import
Peter Amstutz
2020-04-21
Updated shex and manditory fields and stuff
lltommy
2020-04-20
Merge pull request #29 from inutano/fix-mappings
LLTommy
2020-04-20
Merge pull request #28 from AndreaGuarracino/patch-8
LLTommy
2020-04-20
fix MinION to ONT
Tazro Inutano Ohta
2020-04-20
Fixing string -> URI in speciman, plus other things
lltommy
2020-04-19
added 'np/op' control for specimen_source
Andrea Guarracino
2020-04-19
Further updates to our NCBI dictonaries to translate this s*** to our model
lltommy
2020-04-19
fixed missing variable and managed comma in dicts
Andrea Guarracino
2020-04-19
Updating NCBI dictonaries, adding UI options, small yaml schema changes
lltommy
2020-04-19
Merge 984f74f7d7219c83d280b6eee46cba4aed4298bb
Pjotr Prins
2020-04-19
Merge branch 'master' into patch-6
Pjotr Prins
2020-04-19
Merge pull request #27 from AndreaGuarracino/patch-7
Pjotr Prins
2020-04-19
Merge pull request #23 from AndreaGuarracino/patch-3
Pjotr Prins
2020-04-18
dictionaries for mapping
Andrea Guarracino
2020-04-18
ncbi_speciesman_source mapping
Andrea Guarracino
2020-04-18
Delete dict_ontology_standardization
Andrea Guarracino
2020-04-18
ncbi_speciesman_source mapping
Andrea Guarracino
2020-04-18
new script release
Andrea Guarracino
2020-04-15
added type id check
Andrea Guarracino
2020-04-15
accessions list CoV-2 from NCBI Virus 2020/04/15
Andrea Guarracino
2020-04-14
accessions list CoV-2 from NCBI Virus 2020/04/14
Andrea Guarracino
2020-04-14
Rename script/from_genbank_to_fasta_and_yaml.py to scripts/from_genbank_to_fa...
Andrea Guarracino
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