aboutsummaryrefslogtreecommitdiff
path: root/bh20sequploader
AgeCommit message (Expand)Author
2020-04-14Updated yaml schema and examples - plus ShEX shape to go along with it. Still...lltommy
2020-04-13Inject path to find module bh20sequploaderPjotr Prins
2020-04-13Add __init__.py and fix importsPeter Amstutz
2020-04-13Closes #5Pjotr Prins
2020-04-13Starting to turn values into IRIs ...lltommy
2020-04-11Adding noLinkCheck to rootlltommy
2020-04-11Adding descriptions to the yml schema, slight changes to the yml schemalltommy
2020-04-10Propagating metadata to output works now.Peter Amstutz
2020-04-10Fix swapped fasta/fastqPeter Amstutz
2020-04-10Add qc_fastaPeter Amstutz
2020-04-10Fix up fasta/fastq validationPeter Amstutz
2020-04-10Validate & propagate metadataPeter Amstutz
2020-04-10Merge pull request #6 from uniqueg/fa_fq_validationPjotr Prins
2020-04-10Fixed TypeError: 'module' object is not callablePjotr Prins
2020-04-10validate seq format with magic fileAlex Kanitz
2020-04-10Updating schema and examples, including URIslltommy
2020-04-09Moved Guix documentation into separate file (as it confused people ;)Pjotr Prins
2020-04-09Add "sequencefile" for the metadata subject.Peter Amstutz
2020-04-09Adding functionality of turning keys into ontology terms (URI). This is work ...lltommy
2020-04-09Updating schema and examples. This is still work in progress but we get therelltommy
2020-04-08Fastq now runs through fastq2fasta pipelinePeter Amstutz
2020-04-07Add metadata validation with schema-saladPeter Amstutz
2020-04-07Merge branch 'master' of https://github.com/arvados/bh20-seq-resourcelltommy
2020-04-07adding dummy metadata qc to the projectlltommy
2020-04-07Now moves collections into 'validated sequences' projectPeter Amstutz
2020-04-06- Added some output and run main() by defaultPjotr Prins
2020-04-06Remove backup filePjotr Prins
2020-04-06Add service to automatically run a workflow on collections uploaded to a proj...Peter Amstutz
2020-04-06Now uploads dataPeter Amstutz
2020-04-06Start projectPeter Amstutz
generated by cgit v1.2.3 (git 2.45.2) at 2024-11-26 11:23:52 +0000