Age | Commit message (Collapse) | Author | |
---|---|---|---|
2020-07-16 | Merge pull request #98 from arvados/analysis-refactor | Peter Amstutz | |
Analysis refactor | |||
2020-07-16 | Add "validated" and "running workflows" tables to statusanalysis-refactor | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Improve uploader reporting. | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Cleanup script also clears errors for revalidate | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Improve upload form layout. | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Catch exceptions | Peter Amstutz | |
Add script to cleanup bad uploads. Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Make license optional | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Make license optional for now | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Refactor analysis code into a class | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-16 | Blog: workflows | Pjotr Prins | |
2020-07-16 | Remove extra exclamation mark | Pjotr Prins | |
2020-07-16 | Add edit link for download page | Pjotr Prins | |
2020-07-16 | Add edit icon to text on github | Pjotr Prins | |
Closes #76 | |||
2020-07-16 | Change CSS to make BLOG more readable | Pjotr Prins | |
2020-07-16 | Add reference to FAIR | Pjotr Prins | |
2020-07-16 | Addes ESR logo and cropped CWL logo | Pjotr Prins | |
2020-07-16 | Make license optional for now | Pjotr Prins | |
2020-07-15 | License RDF | Pjotr Prins | |
2020-07-15 | Add RDF output | Pjotr Prins | |
2020-07-15 | Merge pull request #95 from AndreaGuarracino/patch-1 | Pjotr Prins | |
little scripts improvements, metadata update for SRA samples | |||
2020-07-15 | Web: add license to input form | Pjotr Prins | |
2020-07-15 | Load metadata locally without pkg_resources | Pjotr Prins | |
2020-07-15 | Update Guix install | Pjotr Prins | |
2020-07-15 | Merge pull request #97 from pjotrp/master | Pjotr Prins | |
Add license metadata to record | |||
2020-07-14 | Started documenting EBI submission | Pjotr Prins | |
2020-07-13 | Add ontology and schema for license information. For review. | Pjotr Prins | |
2020-07-12 | added a suffix to distinguish which script created the error/warning files | AndreaGuarracino | |
2020-07-12 | Generate About page | Pjotr Prins | |
2020-07-12 | Docs: started on metadata modification | Pjotr Prins | |
2020-07-12 | CounterDB | Pjotr Prins | |
2020-07-12 | About page: add Andrea and Erik; add CC0 license link | Pjotr Prins | |
2020-07-12 | Remove duplicate counter | Pjotr Prins | |
2020-07-12 | Remove duplicate counter | Pjotr Prins | |
2020-07-12 | Remove duplicate counter | Pjotr Prins | |
2020-07-10 | metadata with missing host_species are not created | AndreaGuarracino | |
2020-07-10 | an output file is created with the accessions for which no YAML file is created | AndreaGuarracino | |
2020-07-10 | updated metadata source | AndreaGuarracino | |
2020-07-10 | other term for Homo sapiens (for SRA samples) | Andrea Guarracino | |
2020-07-09 | Skip certificate check - this was upstreamed in Arvados, so we can remove later | Pjotr Prins | |
2020-07-09 | Merge pull request #93 from AndreaGuarracino/patch-22 | Pjotr Prins | |
fixed bug that lead to invalid sample_sequencing_technology values | |||
2020-07-09 | fixed bug that lead to invalid sample_sequencing_technology values | Andrea Guarracino | |
2020-07-08 | Adding missing GPS coordinates et all | lltommy | |
2020-07-08 | Try to fix lab_address wrong predicate, fix submitter shape on the way and ↵ | lltommy | |
hopefully brought it in synch with the yaml | |||
2020-07-08 | Merge pull request #92 from arvados/upload-download-status | Peter Amstutz | |
Split upload tab. Add upload status tab. Also a bunch of QC and uploader improvements. | |||
2020-07-08 | Give uploader an option to trust local validation (for batch imports)upload-download-status | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-08 | Uploader checks for duplicates | Peter Amstutz | |
2020-07-08 | Avoid redundant loading of schema | Peter Amstutz | |
2020-07-08 | Add --revalidate and fix checking/updating properties. | Peter Amstutz | |
2020-07-08 | Hack in a valid-uri check | Peter Amstutz | |
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | |||
2020-07-08 | Get count from arvados | Peter Amstutz | |
Separate pending/rejected tables "Lastest results" is latest successful run. Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> |