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2020-07-17Map refactoring, now shows on HOMEPjotr Prins
2020-07-17Map is backPjotr Prins
2020-07-17Refactoring map codePjotr Prins
2020-07-17Add Curii svgPjotr Prins
2020-07-17Align Curii imagePjotr Prins
2020-07-17Blog: workflowsPjotr Prins
2020-07-17Remove extra exclamation markPjotr Prins
2020-07-16Report similarity == 0Peter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Merge pull request #98 from arvados/analysis-refactorPeter Amstutz
Analysis refactor
2020-07-16Add "validated" and "running workflows" tables to statusanalysis-refactorPeter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Improve uploader reporting.Peter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Cleanup script also clears errors for revalidatePeter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Improve upload form layout.Peter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Catch exceptionsPeter Amstutz
Add script to cleanup bad uploads. Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Make license optionalPeter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Make license optional for nowPeter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Refactor analysis code into a classPeter Amstutz
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
2020-07-16Blog: workflowsPjotr Prins
2020-07-16Remove extra exclamation markPjotr Prins
2020-07-16Add edit link for download pagePjotr Prins
2020-07-16Add edit icon to text on githubPjotr Prins
Closes #76
2020-07-16Change CSS to make BLOG more readablePjotr Prins
2020-07-16Add reference to FAIRPjotr Prins
2020-07-16Addes ESR logo and cropped CWL logoPjotr Prins
2020-07-16Make license optional for nowPjotr Prins
2020-07-15License RDFPjotr Prins
2020-07-15Add RDF outputPjotr Prins
2020-07-15Merge pull request #95 from AndreaGuarracino/patch-1Pjotr Prins
little scripts improvements, metadata update for SRA samples
2020-07-15Web: add license to input formPjotr Prins
2020-07-15Load metadata locally without pkg_resourcesPjotr Prins
2020-07-15Update Guix installPjotr Prins
2020-07-15Merge pull request #97 from pjotrp/masterPjotr Prins
Add license metadata to record
2020-07-14Started documenting EBI submissionPjotr Prins
2020-07-13Add ontology and schema for license information. For review.Pjotr Prins
2020-07-12added a suffix to distinguish which script created the error/warning filesAndreaGuarracino
2020-07-12Generate About pagePjotr Prins
2020-07-12Docs: started on metadata modificationPjotr Prins
2020-07-12CounterDBPjotr Prins
2020-07-12About page: add Andrea and Erik; add CC0 license linkPjotr Prins
2020-07-12Remove duplicate counterPjotr Prins
2020-07-12Remove duplicate counterPjotr Prins
2020-07-12Remove duplicate counterPjotr Prins
2020-07-10metadata with missing host_species are not createdAndreaGuarracino
2020-07-10an output file is created with the accessions for which no YAML file is createdAndreaGuarracino
2020-07-10updated metadata sourceAndreaGuarracino
2020-07-10other term for Homo sapiens (for SRA samples)Andrea Guarracino
2020-07-09Skip certificate check - this was upstreamed in Arvados, so we can remove laterPjotr Prins
2020-07-09Merge pull request #93 from AndreaGuarracino/patch-22Pjotr Prins
fixed bug that lead to invalid sample_sequencing_technology values
2020-07-09fixed bug that lead to invalid sample_sequencing_technology valuesAndrea Guarracino
2020-07-08Adding missing GPS coordinates et alllltommy
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