bh20-seq-resource - Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis

Age	Commit message (Expand)	Author
2020-04-28	Update spodgi docker image	Peter Amstutz
2020-04-28	Call clustalw to compare sequence to reference	Peter Amstutz
2020-04-28	Whatever happend to the minimal metadata, I restored it	lltommy
2020-04-28	Adding field 'publication' to the maximum example	lltommy
2020-04-28	Changes to the structure - we use lists now instead of strings where it makes...	lltommy
2020-04-26	Add enrichment vocabularies to git	lltommy
2020-04-26	Pushing some new functions, rename some old ones	lltommy
2020-04-26	Adding a function, correcting some variable names	lltommy
2020-04-26	Updating dics	lltommy
2020-04-26	Merge pull request #39 from BonfaceKilz/feature/display-results-of-api-consum...	LLTommy
2020-04-26	Merge from remote branch into feature/display-results-of-api-consumption	BonfaceKilz
2020-04-26	Update styles to match suggested mockup	BonfaceKilz
2020-04-26	Display the output of the queries as prettified JSON for now	BonfaceKilz
2020-04-26	Jsonify response and pick the values	BonfaceKilz
2020-04-26	Add basic structure for interacting with the API	BonfaceKilz
2020-04-26	Remove unnecessary JS	BonfaceKilz
2020-04-26	Put JS code in its own JS file	BonfaceKilz
2020-04-26	Reposition sponsor logo at the bottom	BonfaceKilz
2020-04-26	Put CSS code into it's own separate CSS file	BonfaceKilz
2020-04-26	Wrap extra flags to cater for non-bash terminals	BonfaceKilz
2020-04-26	Make package data accessible from `setup.py`	BonfaceKilz
2020-04-26	Update .gitignore file	BonfaceKilz
2020-04-26	Update styles to match suggested mockup	BonfaceKilz
2020-04-26	Display the output of the queries as prettified JSON for now	BonfaceKilz
2020-04-26	Jsonify response and pick the values	BonfaceKilz
2020-04-26	Add basic structure for interacting with the API	BonfaceKilz
2020-04-25	Remove unnecessary JS	BonfaceKilz
2020-04-25	Put JS code in its own JS file	BonfaceKilz
2020-04-25	Reposition sponsor logo at the bottom	BonfaceKilz
2020-04-25	Put CSS code into it's own separate CSS file	BonfaceKilz
2020-04-25	Wrap extra flags to cater for non-bash terminals	BonfaceKilz
2020-04-24	Add script that updates Virtuoso - run as a CRON job	Pjotr Prins
2020-04-24	Expand on Guix container invocation	Pjotr Prins
2020-04-24	Make package data accessible from `setup.py`	BonfaceKilz
2020-04-24	Update .gitignore file	BonfaceKilz
2020-04-23	Merge pull request #34 from AndreaGuarracino/patch-12	LLTommy
2020-04-23	Adding API endpoints to drive the homepage. Dirty but functional	lltommy
2020-04-23	Merge pull request #1 from AndreaGuarracino/patch-11	Andrea Guarracino
2020-04-23	code cleaning, refactoring, submitter name and address	Andrea Guarracino
2020-04-23	added nasal swab for several new IDs	Andrea Guarracino
2020-04-23	updated IDs list - 2020/04/23 - 1436 IDs	Andrea Guarracino
2020-04-23	adding a submitter comment field	lltommy
2020-04-23	Adding a third sequence technology option	lltommy
2020-04-23	Merge pull request #30 from adamnovak/patch-3	LLTommy
2020-04-23	Merge branch 'master' into patch-3	LLTommy
2020-04-23	Merge pull request #33 from AndreaGuarracino/patch-9	LLTommy
2020-04-23	Merge pull request #32 from AndreaGuarracino/patch-10	LLTommy
2020-04-22	code cleaning, checking and writing missing term on file	Andrea Guarracino
2020-04-22	created dict for host health status	Andrea Guarracino
2020-04-22	added some rows in the speciesman dict	Andrea Guarracino