index
:
bh20-seq-resource
analysis-refactor
fasta-subset-from-query
generate-cwl
master
new_assembly_method_field
pangenome_workflow_abpoa
upload-download-status
uuid-for-resource
yamlfa2ttl
Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
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Author
2020-08-22
Reworded blurb
Pjotr Prins
2020-08-22
Small text fixes
Pjotr Prins
2020-08-22
guix-deploy script
Pjotr Prins
2020-08-20
Update links to reflect latest workflow
Peter Amstutz
2020-08-19
Fix output parameters
Peter Amstutz
2020-08-19
Scaling pangenome generation
Peter Amstutz
2020-08-19
Consolidate steps to scale graph generation workflow
Peter Amstutz
2020-08-19
Merge pull request #101 from AndreaGuarracino/patch-3
Peter Amstutz
2020-08-19
used builtin hashlib md5 for the deduplication step
AndreaGuarracino
2020-08-19
Merge pull request #100 from AndreaGuarracino/patch-3
Peter Amstutz
2020-08-19
integrated the deduplication step in the sorting by quality and length script
AndreaGuarracino
2020-08-05
Merge pull request #99 from AndreaGuarracino/patch-2
Peter Amstutz
2020-07-27
added in the FAQ three questions from the BCC 2020 attendees
AndreaGuarracino
2020-07-27
added workflow to sort a multifasta by quality and length, and added the over...
AndreaGuarracino
2020-07-27
added spoa workflow in a low memory consumption mode
AndreaGuarracino
2020-07-27
new workflow for odgi building from spoa gfa
AndreaGuarracino
2020-07-27
updated org files, removing unuseful information and adding the BCC2020 video...
AndreaGuarracino
2020-07-27
updated homepage image, changing its name
AndreaGuarracino
2020-07-27
added thumbnail and big poster in the footer
AndreaGuarracino
2020-07-27
fixed repetition of CC licenses
Andrea Guarracino
2020-07-21
Updated REST API doc
Pjotr Prins
2020-07-21
sequencer/mapper
Pjotr Prins
2020-07-21
Sample date and specimen
Pjotr Prins
2020-07-21
Add sequencer JSON/XML output
Pjotr Prins
2020-07-21
Working on search
Pjotr Prins
2020-07-21
Documenting exports and REST API
Pjotr Prins
2020-07-20
Add apidoc end point to docs
Pjotr Prins
2020-07-20
Adding an endpoint for documentation
Pjotr Prins
2020-07-20
REST API HTML output
Pjotr Prins
2020-07-20
REST API
Pjotr Prins
2020-07-20
REST API
Pjotr Prins
2020-07-20
Start Public REST API
Pjotr Prins
2020-07-19
EBI form filling
Pjotr Prins
2020-07-19
Moch XML output
Pjotr Prins
2020-07-19
Search table
Pjotr Prins
2020-07-19
Search table
Pjotr Prins
2020-07-19
Wiring up export function
Pjotr Prins
2020-07-18
Map: cleanup CSS
Pjotr Prins
2020-07-18
Map: show count sequences
Pjotr Prins
2020-07-18
Map: import feature settings
Pjotr Prins
2020-07-18
Updating stylesheets and about page after receiving feedback.
Pjotr Prins
2020-07-17
Comment out some broken links for now
Peter Amstutz
2020-07-17
Make sure move_fastq_to_fasta_results gets everything
Peter Amstutz
2020-07-17
Merge branch 'master' of github.com:pjotrp/bh20-seq-resource
Pjotr Prins
2020-07-17
Preparing for EBI submission
Pjotr Prins
2020-07-17
Started EBI submission
Pjotr Prins
2020-07-17
Started documenting EBI submission
Pjotr Prins
2020-07-17
Merge branch 'master' of github.com:pjotrp/bh20-seq-resource
Pjotr Prins
2020-07-17
Preparing for EBI submission
Pjotr Prins
2020-07-17
Started EBI submission
Pjotr Prins
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