diff options
Diffstat (limited to 'workflows/yamlfa2ttl/check_format.cwl')
-rw-r--r-- | workflows/yamlfa2ttl/check_format.cwl | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/workflows/yamlfa2ttl/check_format.cwl b/workflows/yamlfa2ttl/check_format.cwl new file mode 100644 index 0000000..9eee58a --- /dev/null +++ b/workflows/yamlfa2ttl/check_format.cwl @@ -0,0 +1,23 @@ +#!/usr/bin/env cwl-runner + +cwlVersion: v1.1 +class: CommandLineTool +baseCommand: python3 + +inputs: + script: + type: File + inputBinding: {position: 1} + default: {class: File, location: check_format.py} + path_fasta: + type: string + inputBinding: {position: 2} + format_to_check: + type: string + inputBinding: {position: 3} + path_valid_formats: + type: File + inputBinding: {position: 4} + default: {class: File, location: ../../bh20sequploader/validation/formats} + +outputs: [] |