diff options
Diffstat (limited to 'workflows/pangenome-generate/arvados-and-samtools-dockerfile/Dockerfile')
| -rw-r--r-- | workflows/pangenome-generate/arvados-and-samtools-dockerfile/Dockerfile | 10 |
1 files changed, 10 insertions, 0 deletions
diff --git a/workflows/pangenome-generate/arvados-and-samtools-dockerfile/Dockerfile b/workflows/pangenome-generate/arvados-and-samtools-dockerfile/Dockerfile new file mode 100644 index 0000000..6f857ac --- /dev/null +++ b/workflows/pangenome-generate/arvados-and-samtools-dockerfile/Dockerfile @@ -0,0 +1,10 @@ +FROM debian:10 +ENV DEBIAN_FRONTEND noninteractive +RUN apt-get update -q +RUN apt-get install -yq --no-install-recommends gnupg +ADD 1078ECD7.key /tmp/ +RUN cat /tmp/1078ECD7.key | apt-key add - +RUN echo 'deb http://apt.arvados.org/ buster main' > /etc/apt/sources.list.d/apt.arvados.org-stable.list +RUN apt-get update -q && apt-get install -yq --no-install-recommends samtools python3-python-client +RUN rm -f /usr/bin/python && ln -s /usr/share/python3/dist/python3-python-client/bin/python /usr/bin/python +RUN rm -f /usr/bin/python3 && ln -s /usr/share/python3/dist/python3-python-client/bin/python /usr/bin/python3 |