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diff --git a/doc/web/export.org b/doc/web/export.org new file mode 100644 index 0000000..aa7d680 --- /dev/null +++ b/doc/web/export.org @@ -0,0 +1,32 @@ +#+TITLE: About/FAQ +#+AUTHOR: Pjotr Prins + +* Table of Contents :TOC:noexport: + - [[#export-data][Export data]] + - [[#sparql-api][SPARQL API]] + - [[#rest-api][REST API]] + - [[#export-ebiena-forms][Export EBI/ENA Forms]] + +* Export data + +Apart from straight file [[http://covid19.genenetwork.org/download][downloads]] COVID-19 PubSeq allows for +exporting forms and data for other services. + +* SPARQL API + + +First of all, PubSeq exports a SPARQL endpoint [[http://sparql.genenetwork.org/sparql/][here]] that allows you do +do any query on the data. See this [[http://covid19.genenetwork.org/blog?id=using-covid-19-pubseq-part1][document]] for examples. + +* REST API + +In addition to above flexible SPARQL endpoint - which is essentially +is a query REST API - PubSeq exports its own +[[http://covid19.genenetwork.org/apidoc][REST API]]. + +* Export EBI/ENA Forms + +Uploading data to EBI/ENA with PubSeq is described [[http://covid19.genenetwork.org/blog?id=using-covid-19-pubseq-part6][here]]. + +To export, +first search for an uploaded entry through its identifier: |