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| -rw-r--r-- | LICENSE | 201 | ||||
| -rw-r--r-- | README.rst | 3 | ||||
| -rw-r--r-- | bh20sequploader/main.py | 2 | ||||
| -rw-r--r-- | bh20sequploader/main.py~ | 2 | ||||
| -rw-r--r-- | gittaggers.py | 36 | ||||
| -rw-r--r-- | setup.py | 44 |
6 files changed, 288 insertions, 0 deletions
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We also recommend that a + file or class name and description of purpose be included on the + same "printed page" as the copyright notice for easier + identification within third-party archives. + + Copyright {yyyy} {name of copyright owner} + + Licensed under the Apache License, Version 2.0 (the "License"); + you may not use this file except in compliance with the License. + You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + + Unless required by applicable law or agreed to in writing, software + distributed under the License is distributed on an "AS IS" BASIS, + WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + See the License for the specific language governing permissions and + limitations under the License. diff --git a/README.rst b/README.rst new file mode 100644 index 0000000..71ec67e --- /dev/null +++ b/README.rst @@ -0,0 +1,3 @@ +========================================== +Sequence uploader +========================================== diff --git a/bh20sequploader/main.py b/bh20sequploader/main.py new file mode 100644 index 0000000..e3095b2 --- /dev/null +++ b/bh20sequploader/main.py @@ -0,0 +1,2 @@ +def main(): + print("hello world") diff --git a/bh20sequploader/main.py~ b/bh20sequploader/main.py~ new file mode 100644 index 0000000..336e825 --- /dev/null +++ b/bh20sequploader/main.py~ @@ -0,0 +1,2 @@ +def main(): + pass diff --git a/gittaggers.py b/gittaggers.py new file mode 100644 index 0000000..e91cf0f --- /dev/null +++ b/gittaggers.py @@ -0,0 +1,36 @@ +import subprocess +import time +import pkg_resources +from setuptools.command.egg_info import egg_info + +SETUPTOOLS_VER = pkg_resources.get_distribution( + "setuptools").version.split('.') + +RECENT_SETUPTOOLS = int(SETUPTOOLS_VER[0]) > 40 or ( + int(SETUPTOOLS_VER[0]) == 40 and int(SETUPTOOLS_VER[1]) > 0) or ( + int(SETUPTOOLS_VER[0]) == 40 and int(SETUPTOOLS_VER[1]) == 0 and + int(SETUPTOOLS_VER[2]) > 0) + +class EggInfoFromGit(egg_info): + """Tag the build with git commit timestamp. + + If a build tag has already been set (e.g., "egg_info -b", building + from source package), leave it alone. + """ + + def git_timestamp_tag(self): + gitinfo = subprocess.check_output( + ['git', 'log', '--first-parent', '--max-count=1', + '--format=format:%ct', '.']).strip() + return time.strftime('.%Y%m%d%H%M%S', time.gmtime(int(gitinfo))) + + def tags(self): + if self.tag_build is None: + try: + self.tag_build = self.git_timestamp_tag() + except subprocess.CalledProcessError: + pass + return egg_info.tags(self) + + if RECENT_SETUPTOOLS: + vtags = property(tags) diff --git a/setup.py b/setup.py new file mode 100644 index 0000000..acff69b --- /dev/null +++ b/setup.py @@ -0,0 +1,44 @@ +#!/usr/bin/env python3 +import os +import sys + +import setuptools.command.egg_info as egg_info_cmd +from setuptools import setup + +SETUP_DIR = os.path.dirname(__file__) +README = os.path.join(SETUP_DIR, "README.rst") + +try: + import gittaggers + + tagger = gittaggers.EggInfoFromGit +except ImportError: + tagger = egg_info_cmd.egg_info + +install_requires = [] + +needs_pytest = {"pytest", "test", "ptr"}.intersection(sys.argv) +pytest_runner = ["pytest < 6", "pytest-runner < 5"] if needs_pytest else [] + +setup( + name="bh20-seq-uploader", + version="1.0", + description="Biohackathon sequence uploader", + long_description=open(README).read(), + long_description_content_type="text/x-rst", + author="Peter Amstutz", + author_email="peter.amstutz@curii.com", + license="Apache 2.0", + packages=["bh20sequploader"], + install_requires=install_requires, + setup_requires=[] + pytest_runner, + tests_require=["pytest<5"], + entry_points={ + "console_scripts": [ + "bh20sequploader=bh20sequploader.main:main" + ] + }, + zip_safe=True, + cmdclass={"egg_info": tagger}, + python_requires=">=3.5, <4", +) |